RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ENDOGQ14249 297 aaKnown RBP8.17□□□□□ -1.1
USP39-212ENST00000465514 CYBRD1Q53TN4 286 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 ZMAT1Q5H9K5 638 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 MTX3Q5HYI7 312 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 METTL21CQ5VZV1 264 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 RUSC1-AS1Q66K80 236 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 ARL9Q6T311 187 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
USP39-212ENST00000465514 FOXL2NBQ6ZUU3 175 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 IGFN1Q86VF2 1251 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 LRRC75AQ8NAA5 344 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 OR8J3Q8NGG0 315 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 FNDC8Q8TC99 324 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 C10orf82Q8WW14 230 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 ZNF583Q96ND8 569 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 MMP26Q9NRE1 261 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 TNFRSF19Q9NS68 423 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 EGFL7Q9UHF1 273 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 PURGQ9UJV8 347 aaKnown RBP8.17□□□□□ -1.1
USP39-212ENST00000465514 RNF114Q9Y508 228 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 AUP1Q9Y679 476 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 IGHV3OR16-10A0A075B7F0 116 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 TRAV27A0A087WT01 109 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 HTR3EA5X5Y0 456 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 C12orf71A8MTZ7 269 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 TRAPPC2LH3BP13 241 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 EDF1O60869 148 aaKnown RBP8.16□□□□□ -1.1
USP39-212ENST00000465514 IGHV4-38-2P0DP08 117 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 MSR1P21757 451 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 FUT4P22083 530 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 KDELR2P33947 212 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 ST3GAL3Q11203 375 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 FHL1Q13642 323 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 LRRC23Q53EV4 343 aaPredicted RBP8.16□□□□□ -1.1
USP39-212ENST00000465514 FAM205BPQ63HN1 556 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 ERICH5Q6P6B1 374 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 FIP1L1Q6UN15 594 aaKnown RBP8.16□□□□□ -1.1
USP39-212ENST00000465514 ZER1Q7Z7L7 766 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 MICU2Q8IYU8 434 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 DYNC2H1Q8NCM8 4307 aaKnown RBP8.16□□□□□ -1.1
USP39-212ENST00000465514 OR2Z1Q8NG97 314 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 OR51A7Q8NH64 312 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 SIKE1Q9BRV8 207 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 POFUT1Q9H488 388 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 EMC7Q9NPA0 242 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 POLE4Q9NR33 117 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 TMEM106BQ9NUM4 274 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 ASH2LQ9UBL3 628 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 A4GNTQ9UNA3 340 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 TENM2Q9NT68 2774 aa8.16□□□□□ -1.1
USP39-212ENST00000465514 C5orf63A6NC05 138 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 A6NIZ1 184 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 HMGB1P1B2RPK0 211 aaPredicted RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 H7C1C5 153 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 MRASO14807 208 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 ABHD16AO95870 558 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 NPPAP01160 153 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 CSF1P09603 554 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 COX5BP10606 129 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 ZNF12P17014 697 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 GSTM3P21266 225 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 KITLGP21583 273 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 TNFSF4P23510 183 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 IFNA8P32881 189 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 YAP1P46937 504 aaKnown RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 SLC6A9P48067 706 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 RAP1BP61224 184 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 LCN6P62502 163 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 RAP1AP62834 184 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 SELENOWP63302 87 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 ZNF154Q13106 437 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 PDCD1Q15116 288 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 ZMYND11Q15326 602 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 TMEM155Q4W5P6 130 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 Q6ZR03 302 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 C9orf139Q6ZV77 190 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 OAFQ86UD1 273 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 LRRC28Q86X40 367 aaPredicted RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 NRMQ8IXM6 262 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 SPICQ8N5J4 248 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 ZNF283Q8N7M2 679 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 NPEPL1Q8NDH3 523 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 CMBLQ96DG6 245 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 SAMD8Q96LT4 415 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 PRRC1Q96M27 445 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 TMEM120AQ9BXJ8 343 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 MARCH7Q9H992 704 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 PATZ1Q9HBE1 687 aaKnown RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 MAN2C1Q9NTJ4 1040 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 TBCCD1Q9NVR7 557 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 AURKAIP1Q9NWT8 199 aaPredicted RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 RHCGQ9UBD6 479 aa8.15□□□□□ -1.1
USP39-212ENST00000465514 NDRG4Q9ULP0 352 aaKnown RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 POLR3KQ9Y2Y1 108 aaPredicted RBP8.15□□□□□ -1.1
USP39-212ENST00000465514 STARD10Q9Y365 291 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms