RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 APLNRP35414 380 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 EFNA4P52798 201 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 RAD23AP54725 363 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 PSG4Q00888 419 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 TEKQ02763 1124 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 SCRN3Q0VDG4 424 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 DBPQ10586 325 aaPredicted RBP15.29■□□□□ 0.04
COL7A1-205ENST00000465238 AQP6Q13520 282 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 SNAPC1Q16533 368 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 CHRFAM7AQ494W8 412 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 OTPQ5XKR4 325 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 ZNF525Q8N782 197 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 SLC30A7Q8NEW0 376 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 SLC26A10Q8NG04 563 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 OR51L1Q8NGJ5 315 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 FAM168AQ92567 244 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 EME1Q96AY2 570 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 CDADC1Q9BWV3 514 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 NMNAT2Q9BZQ4 307 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 OR2H1Q9GZK4 316 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 RIBC2Q9H4K1 309 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 USE1Q9NZ43 259 aa15.29■□□□□ 0.04
COL7A1-205ENST00000465238 FAM183AA6NL82 134 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 TFP02787 698 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ALPLP05186 524 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 GYPBP06028 91 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 CSF3P09919 207 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ANPEPP15144 967 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ZNF823P16415 610 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 FMO3P31513 532 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ALDH3A2P51648 485 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 BLVRAP53004 296 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 GALK2Q01415 458 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 RCN1Q15293 331 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 MEP1BQ16820 701 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 TBC1D28Q2M2D7 210 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 C6orf52Q5T4I8 152 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 SLX4IPQ5VYV7 408 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 PLBD1Q6P4A8 553 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ZBTB49Q6ZSB9 765 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ZNF584Q8IVC4 421 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 AKR7LQ8NHP1 331 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 WNT5BQ9H1J7 359 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 MED20Q9H944 212 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 CDH20Q9HBT6 801 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ASH2LQ9UBL3 628 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 SPEF1Q9Y4P9 236 aa15.28■□□□□ 0.04
COL7A1-205ENST00000465238 ZAR1LA6NP61 321 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 VSTM5A8MXK1 200 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 CLUP10909 449 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 STOMP27105 288 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 APEX1P27695 318 aaKnown RBP15.27■□□□□ 0.04
COL7A1-205ENST00000465238 ZNF774Q6NX45 483 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 CPOQ8IVL8 374 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 CPEB3Q8NE35 698 aaKnown RBP15.27■□□□□ 0.04
COL7A1-205ENST00000465238 OR6K6Q8NGW6 343 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 OR2AJ1Q8NGZ0 328 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 C10orf105Q8TEF2 133 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 PTP4A1Q93096 173 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 HCAR1Q9BXC0 346 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 GABARAPL3Q9BY60 117 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 OR51V1Q9H2C8 321 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 KCNG2Q9UJ96 466 aa15.27■□□□□ 0.04
COL7A1-205ENST00000465238 TVP23AA6NH52 213 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 SGCEO43556 437 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 F12P00748 615 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-205ENST00000465238 CCL2P13500 99 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 ZNF35P13682 527 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 CCNOP22674 350 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 EPHA2P29317 976 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
COL7A1-205ENST00000465238 GDI2P50395 445 aaKnown RBP15.26■□□□□ 0.03
COL7A1-205ENST00000465238 ELF3P78545 371 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-205ENST00000465238 HGFACQ04756 655 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 SWI5Q1ZZU3 235 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 GJC3Q8NFK1 279 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 ZNRF4Q8WWF5 429 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 HINT3Q9NQE9 182 aaKnown RBP15.26■□□□□ 0.03
COL7A1-205ENST00000465238 MRPL22Q9NWU5 206 aaKnown RBP15.26■□□□□ 0.03
COL7A1-205ENST00000465238 PLEK2Q9NYT0 353 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 CDC42EP3Q9UKI2 254 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 CUBNO60494 3623 aa15.26■□□□□ 0.03
COL7A1-205ENST00000465238 DOK2O60496 412 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 GLCEO94923 617 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 NR4A1P22736 598 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 SNTB2Q13425 540 aaKnown RBP15.25■□□□□ 0.03
COL7A1-205ENST00000465238 TRIP10Q15642 601 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 ZIK1Q3SY52 487 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-205ENST00000465238 KLHL12Q53G59 568 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 C12orf73Q69YU5 71 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 KRT80Q6KB66 452 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 VHLLQ6RSH7 139 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 ZNF511Q8NB15 262 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 NUP37Q8NFH4 326 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 SLC29A1Q99808 456 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 CA10Q9NS85 328 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 TMEM160Q9NX00 188 aa15.25■□□□□ 0.03
COL7A1-205ENST00000465238 NDRG4Q9ULP0 352 aaKnown RBP15.25■□□□□ 0.03
COL7A1-205ENST00000465238 LHFPL6Q9Y693 200 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms