RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 GFOD2Q3B7J2 385 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 C1orf53Q5VUE5 145 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 FAM109BQ6ICB4 259 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 TBC1D3CQ6IPX1 549 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 PSRC1Q6PGN9 363 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 TBC1D3Q8IZP1 549 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 OR4S1Q8NGB4 309 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 OR10G6Q8NH81 332 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 FAM46BQ96A09 425 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 C8orf44Q96CB5 159 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 SLC25A44Q96H78 314 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 ASB16Q96NS5 453 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 AQP10Q96PS8 301 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 KXD1Q9BQD3 176 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 RNF126Q9BV68 326 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 SELENOIQ9C0D9 397 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 S1PR5Q9H228 398 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 RHOFQ9HBH0 211 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 CGGBP1Q9UFW8 167 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 DPP7Q9UHL4 492 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 GDF2Q9UK05 429 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 HHLA2Q9UM44 414 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 EDARQ9UNE0 448 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 B9D1Q9UPM9 204 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 TMED7Q9Y3B3 224 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 WIF1Q9Y5W5 379 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 POMT1Q9Y6A1 747 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 IGLV1-36A0A0B4J1U3 117 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 C5orf51A6NDU8 294 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 WIPF3A6NGB9 483 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ZNF705EA8MWA4 302 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 TGFBR3LH3BV60 316 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 RAB27BO00194 218 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 HRKO00198 91 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 XKRYO14609 159 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OIP5O43482 229 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 SRSF10O75494 262 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 GPANK1O95872 356 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 F12P00748 615 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 BGLAPP02818 100 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ISG15P05161 165 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CSN2P05814 226 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 S100A9P06702 114 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 ERCC1P07992 297 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 NAT2P11245 290 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 MUC1P15941 1255 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 PTAFRP25105 342 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 RABIFP47224 123 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 LSSP48449 732 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 POLR2GP62487 172 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP48-206ENST00000464577 FUT7Q11130 342 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 NFATC4Q14934 902 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 RNF212Q495C1 297 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 PRSS54Q6PEW0 395 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 KCTD9Q7L273 389 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CD163Q86VB7 1156 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 TMEM200AQ86VY9 491 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 HOGA1Q86XE5 327 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ARHGEF39Q8N4T4 335 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ZSCAN4Q8NAM6 433 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 KDF1Q8NAX2 398 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ADAMTS18Q8TE60 1221 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CASTOR1Q8WTX7 329 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 KTI12Q96EK9 354 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 TCEAL7Q9BRU2 100 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CRB3Q9BUF7 120 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 SEC61A2Q9H9S3 476 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 RAB18Q9NP72 206 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 MRPL22Q9NWU5 206 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 OBP2AQ9NY56 170 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 VSX1Q9NZR4 365 aaPredicted RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 ASH2LQ9UBL3 628 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 DNAJB11Q9UBS4 358 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ANAPC10Q9UM13 185 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 R4GMQ9 66 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 PRSS37A4D1T9 235 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 FITM1A5D6W6 292 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR2W5A6NFC9 320 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 C5orf52A6NGY3 159 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CEACAM18A8MTB9 384 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 C1orf196B1AJZ1 125 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 MFNGO00587 321 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 TAAR5O14804 337 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 OR6A2O95222 327 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 BPNT1O95861 308 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 CD5P06127 495 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 FABP1P07148 127 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 SPARCP09486 303 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 RNH1P13489 461 aaKnown RBP6.54□□□□□ -1.36
USP48-206ENST00000464577 PVRP15151 417 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 VAMP1P23763 118 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 ACTR1BP42025 376 aa6.54□□□□□ -1.36
USP48-206ENST00000464577 WASP42768 502 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms