RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CST1P01037 141 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 COX5BP10606 129 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 MMP15P51511 669 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 HIST1H3AP68431 136 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 CCL8P80075 99 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.07□□□□□ -0.64
XRN1-203ENST00000463916 BNIP1Q12981 228 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 ZNF718Q3SXZ3 478 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 HIST2H3PS2Q5TEC6 136 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 HIST2H3AQ71DI3 136 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 PRIMA1Q86XR5 153 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 OR4Q3Q8NH05 313 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 SNX18Q96RF0 628 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 CADM1Q9BY67 442 aaKnown RBP11.07□□□□□ -0.64
XRN1-203ENST00000463916 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 SLCO1C1Q9NYB5 712 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 NDRG4Q9ULP0 352 aaKnown RBP11.07□□□□□ -0.64
XRN1-203ENST00000463916 POMPQ9Y244 141 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 MXRA5Q9NR99 2828 aa11.07□□□□□ -0.64
XRN1-203ENST00000463916 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
XRN1-203ENST00000463916 GSC2O15499 205 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 TLX2O43763 284 aaPredicted RBP11.06□□□□□ -0.64
XRN1-203ENST00000463916 DNAJC8O75937 253 aaPredicted RBP11.06□□□□□ -0.64
XRN1-203ENST00000463916 IL2RGP31785 369 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 RSPO1Q2MKA7 263 aaPredicted RBP11.06□□□□□ -0.64
XRN1-203ENST00000463916 KRTAP21-3Q3LHN1 58 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
XRN1-203ENST00000463916 OR1F12Q8NHA8 337 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 FEVQ99581 238 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 TSSK6Q9BXA6 273 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 DGCR6LQ9BY27 220 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 MRPL22Q9NWU5 206 aaKnown RBP11.06□□□□□ -0.64
XRN1-203ENST00000463916 STARD10Q9Y365 291 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 GRIP1Q9Y3R0 1128 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 MALRD1Q5VYJ5 2156 aa11.06□□□□□ -0.64
XRN1-203ENST00000463916 CRLF1O75462 422 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 ABHD16AO95870 558 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 ZNF23P17027 643 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 PYCR1P32322 319 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 GGT2P36268 569 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 TEKQ02763 1124 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 PSG7Q13046 419 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 FLOT2Q14254 428 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 RPL13AP3Q6NVV1 102 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 LYPD4Q6UWN0 246 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 CFAP77Q6ZQR2 320 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 SPATA24Q86W54 205 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 HS3ST5Q8IZT8 346 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 LNX2Q8N448 690 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 ZNF540Q8NDQ6 660 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 OR10G2Q8NGC3 310 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 OR52L1Q8NGH7 329 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 OR51L1Q8NGJ5 315 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 POP5Q969H6 163 aaKnown RBP11.05□□□□□ -0.64
XRN1-203ENST00000463916 SLCO4A1Q96BD0 722 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 MSI2Q96DH6 328 aaKnown RBP11.05□□□□□ -0.64
XRN1-203ENST00000463916 TBCCD1Q9NVR7 557 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 ARMC1Q9NVT9 282 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 KLHL21Q9UJP4 597 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 TCRBV3S1A0A5B6 114 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 ZSCAN5BA6NJL1 495 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 A8MV72 311 aaPredicted RBP11.05□□□□□ -0.64
XRN1-203ENST00000463916 WNT9BO14905 357 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 CDC14BO60729 498 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 RP2O75695 350 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 TACSTD2P09758 323 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 PSKH1P11801 424 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 GCH1P30793 250 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 COX10Q12887 443 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 HNRNPA0Q13151 305 aaKnown RBP11.05□□□□□ -0.64
XRN1-203ENST00000463916 TSTQ16762 297 aaKnown RBP11.05□□□□□ -0.64
XRN1-203ENST00000463916 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 CYB5R2Q6BCY4 276 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 SLC18B1Q6NT16 456 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 TMEM154Q6P9G4 183 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 SLC37A3Q8NCC5 494 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 RDH5Q92781 318 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 ELOVL3Q9HB03 270 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 TBC1D23Q9NUY8 699 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
XRN1-203ENST00000463916 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 ZNF16P17020 682 aaPredicted RBP11.04□□□□□ -0.64
XRN1-203ENST00000463916 RBMXP38159 391 aaKnown RBP11.04□□□□□ -0.64
XRN1-203ENST00000463916 RPS27P42677 84 aaKnown RBP11.04□□□□□ -0.64
XRN1-203ENST00000463916 ZNF81P51508 661 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 UNQ6126/PRO20091Q6UXV3 157 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 GJC3Q8NFK1 279 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 OR9Q1Q8NGQ5 310 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 GIPC3Q8TF64 312 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 SNX33Q8WV41 574 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 RBM4Q9BWF3 364 aaKnown RBP11.04□□□□□ -0.64
XRN1-203ENST00000463916 CHODLQ9H9P2 273 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 MSL2Q9HCI7 577 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 ZNF275Q9NSD4 429 aaPredicted RBP11.04□□□□□ -0.64
XRN1-203ENST00000463916 CYB5R1Q9UHQ9 305 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 GPR160Q9UJ42 338 aa11.04□□□□□ -0.64
XRN1-203ENST00000463916 CACNG2Q9Y698 323 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms