RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ELOVL3Q9HB03 270 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 C20orf141Q9NUB4 165 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 NUP50Q9UKX7 468 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 A4GNTQ9UNA3 340 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 POLR3KQ9Y2Y1 108 aaPredicted RBP16.72■□□□□ 0.27
VARS-221ENST00000463184 TIMM10BQ9Y5J6 103 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 ENPP4Q9Y6X5 453 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 MEGF8Q7Z7M0 2845 aa16.72■□□□□ 0.27
VARS-221ENST00000463184 IGHV2-70P01814 119 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 SEMG1P04279 462 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 CST2P09228 141 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 PRTN3P24158 256 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 GUCA1AP43080 201 aaPredicted RBP16.71■□□□□ 0.27
VARS-221ENST00000463184 PCBD1P61457 104 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 FMODQ06828 376 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 ST3GAL3Q11203 375 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 LAPTM4AQ15012 233 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 ARMCX4Q5H9R4 360 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 RFPL4BQ6ZWI9 263 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 DOK3Q7L591 496 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 ZER1Q7Z7L7 766 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 DEFB108BQ8NET1 73 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 FNDC8Q8TC99 324 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 C7orf34Q96L11 122 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 RBP7Q96R05 134 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 WNT5BQ9H1J7 359 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 PURGQ9UJV8 347 aaKnown RBP16.71■□□□□ 0.27
VARS-221ENST00000463184 FAM32AQ9Y421 112 aaKnown RBP16.71■□□□□ 0.27
VARS-221ENST00000463184 V9GYQ6 96 aa16.71■□□□□ 0.27
VARS-221ENST00000463184 TCRBV5S2A0A599 114 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 NGFP01138 241 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 SBK2P0C263 348 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 YAP1P46937 504 aaKnown RBP16.7■□□□□ 0.26
VARS-221ENST00000463184 TNFAIP6P98066 277 aaPredicted RBP16.7■□□□□ 0.26
VARS-221ENST00000463184 ZNF154Q13106 437 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 ARL9Q6T311 187 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 TSEN54Q7Z6J9 526 aaKnown RBP16.7■□□□□ 0.26
VARS-221ENST00000463184 OFCC1Q8IZS5 231 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 KLHL36Q8N4N3 616 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 SPICQ8N5J4 248 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 C4orf45Q96LM5 186 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 DCLRE1CQ96SD1 692 aaKnown RBP16.7■□□□□ 0.26
VARS-221ENST00000463184 FNDC11Q9BVV2 318 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 MSL2Q9HCI7 577 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 MMP26Q9NRE1 261 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 TMEM106BQ9NUM4 274 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 PLEK2Q9NYT0 353 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 NDUFAF4Q9P032 175 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 MED31Q9Y3C7 131 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 AUP1Q9Y679 476 aa16.7■□□□□ 0.26
VARS-221ENST00000463184 AQP12BA6NM10 295 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 J3KTA2 159 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 IGHMP01871 453 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 RHCEP18577 417 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 LAP3P28838 519 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 CDK5R2Q13319 367 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 TMEM155Q4W5P6 130 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 SPRNQ5BIV9 151 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 ALG10Q5BKT4 473 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 ASRGL1Q7L266 308 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 AQP12AQ8IXF9 295 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 SAMD8Q96LT4 415 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 PATZ1Q9HBE1 687 aaKnown RBP16.69■□□□□ 0.26
VARS-221ENST00000463184 POMPQ9Y244 141 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 HIF3AQ9Y2N7 669 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 TANC2Q9HCD6 1990 aa16.69■□□□□ 0.26
VARS-221ENST00000463184 HTR3EA5X5Y0 456 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 FFAR1O14842 300 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 TIMM8AO60220 97 aaPredicted RBP16.68■□□□□ 0.26
VARS-221ENST00000463184 FABP3P05413 133 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 TNFRSF1AP19438 455 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 TUBG1P23258 451 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 TNFSF4P23510 183 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 RPL27P61353 136 aaKnown RBP16.68■□□□□ 0.26
VARS-221ENST00000463184 PSG7Q13046 419 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 FLOT2Q14254 428 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 TRAM2Q15035 370 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 FOXL2NBQ6ZUU3 175 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 SYT9Q86SS6 491 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 LRRC28Q86X40 367 aaPredicted RBP16.68■□□□□ 0.26
VARS-221ENST00000463184 ZNF283Q8N7M2 679 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 MAGIXQ9H6Y5 334 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 IL1RAPQ9NPH3 570 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 TUBG2Q9NRH3 451 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 RHCGQ9UBD6 479 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 ZNF69Q9UC07 566 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 NDRG4Q9ULP0 352 aaKnown RBP16.68■□□□□ 0.26
VARS-221ENST00000463184 INSIG2Q9Y5U4 225 aa16.68■□□□□ 0.26
VARS-221ENST00000463184 DNAJC9-AS1A6NH13 148 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 TRAPPC2LH3BP13 241 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 ZNF12P17014 697 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 GSTM3P21266 225 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 SLC6A9P48067 706 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 GABPB1Q06547 395 aaPredicted RBP16.67■□□□□ 0.26
VARS-221ENST00000463184 BAMBIQ13145 260 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 TOP3AQ13472 1001 aaPredicted RBP16.67■□□□□ 0.26
VARS-221ENST00000463184 FAM98BQ52LJ0 330 aaKnown RBP16.67■□□□□ 0.26
VARS-221ENST00000463184 FAM205BPQ63HN1 556 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 ZNF774Q6NX45 483 aa16.67■□□□□ 0.26
VARS-221ENST00000463184 ZDHHC21Q8IVQ6 265 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms