RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 HAVCR1Q96D42 359 aa9.34□□□□□ -0.91
PTPN7-204ENST00000462815 BPIFA2Q96DR5 249 aa9.34□□□□□ -0.91
PTPN7-204ENST00000462815 OR2V2Q96R30 315 aa9.34□□□□□ -0.91
PTPN7-204ENST00000462815 MRI1Q9BV20 369 aa9.34□□□□□ -0.91
PTPN7-204ENST00000462815 EMC7Q9NPA0 242 aa9.34□□□□□ -0.91
PTPN7-204ENST00000462815 NDRG4Q9ULP0 352 aaKnown RBP9.34□□□□□ -0.91
PTPN7-204ENST00000462815 LRCH1Q9Y2L9 728 aa9.34□□□□□ -0.91
PTPN7-204ENST00000462815 IGHV3OR16-10A0A075B7F0 116 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 TRAV27A0A087WT01 109 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 IGHV2-70DA0A0C4DH43 119 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 H7C1C5 153 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 FFAR1O14842 300 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 FSTL3O95633 263 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 TNFRSF1AP19438 455 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 TUBG1P23258 451 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 MDH2P40926 338 aaKnown RBP9.33□□□□□ -0.92
PTPN7-204ENST00000462815 CTXN1P60606 82 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 LCN6P62502 163 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 RELBQ01201 579 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 SRSF4Q08170 494 aaKnown RBP9.33□□□□□ -0.92
PTPN7-204ENST00000462815 MIDNQ504T8 468 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 MESTQ5EB52 335 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 FAM205BPQ63HN1 556 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 FAM122BQ7Z309 247 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 ZER1Q7Z7L7 766 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 OR8J3Q8NGG0 315 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 WFDC12Q8WWY7 111 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 SLC7A6Q92536 515 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 SLC25A28Q96A46 364 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 CMBLQ96DG6 245 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 PRRC1Q96M27 445 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 RBP7Q96R05 134 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 WACQ9BTA9 647 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 MYLK2Q9H1R3 596 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 TMEM165Q9HC07 324 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 SAR1AQ9NR31 198 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 TUBG2Q9NRH3 451 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 BAG5Q9UL15 447 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 PPP1R3CQ9UQK1 317 aa9.33□□□□□ -0.92
PTPN7-204ENST00000462815 A0A1W2PPL8 197 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 HTR3EA5X5Y0 456 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 C12orf71A8MTZ7 269 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 CDC42EP2O14613 210 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 IMPA2O14732 288 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 MLNRO43193 412 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 DOK2O60496 412 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 IFI30P13284 250 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 CTLA4P16410 223 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 GSTM3P21266 225 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 CPT2P23786 658 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 PMELP40967 661 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 PRKCDQ05655 676 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 GABPB1Q06547 395 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 CCDC92Q53HC0 331 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 CYBRD1Q53TN4 286 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 ESCO2Q56NI9 601 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 OTPQ5XKR4 325 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 FBXW12Q6X9E4 464 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 ZNF841Q6ZN19 808 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 RHOUQ7L0Q8 258 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 KLBQ86Z14 1044 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 NRMQ8IXM6 262 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 OFCC1Q8IZS5 231 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 MUC20Q8N307 709 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 OR52E2Q8NGJ4 325 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 OR13C2Q8NGS9 318 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 OR51A7Q8NH64 312 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 TMIGD2Q96BF3 282 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 MEGF10Q96KG7 1140 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 SSBP3Q9BWW4 388 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 MS4A7Q9GZW8 240 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 PDP1Q9P0J1 537 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-204ENST00000462815 OR5V1Q9UGF6 321 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 IL20RAQ9UHF4 553 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 ADAM18Q9Y3Q7 739 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 SNX13Q9Y5W8 968 aa9.32□□□□□ -0.92
PTPN7-204ENST00000462815 DNAH3Q8TD57 4116 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 TRAV40A0A0B4J280 105 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 TEX13CA0A0J9YWL9 993 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 A6NIZ1 184 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 H0YL77 283 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 J3KTA2 159 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 HOXA3O43365 443 aaPredicted RBP9.31□□□□□ -0.92
PTPN7-204ENST00000462815 SGCEO43556 437 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 CCDC22O60826 627 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 ZNF205O95201 554 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 CYB5R3P00387 301 aaPredicted RBP9.31□□□□□ -0.92
PTPN7-204ENST00000462815 DBHP09172 617 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 RAC2P15153 192 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 TNFSF4P23510 183 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 OMGP23515 440 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 KDELR2P33947 212 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 HTR5AP47898 357 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 KRTAP10-3P60369 221 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 RAP1BP61224 184 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 RAP1AP62834 184 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 SCRN3Q0VDG4 424 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 ST3GAL3Q11203 375 aa9.31□□□□□ -0.92
PTPN7-204ENST00000462815 HLXQ14774 488 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms