RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 GJC3Q8NFK1 279 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 OR2Z1Q8NG97 314 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 OR52L1Q8NGH7 329 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 SLC7A13Q8TCU3 470 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 IPCEF1Q8WWN9 437 aaPredicted RBP7.57□□□□□ -1.2
LDB1-203ENST00000461873 YIPF5Q969M3 257 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 UTP4Q969X6 686 aaKnown RBP7.57□□□□□ -1.2
LDB1-203ENST00000461873 NABP1Q96AH0 204 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 Q96M85 177 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 ERMAPQ96PL5 475 aaPredicted RBP7.57□□□□□ -1.2
LDB1-203ENST00000461873 JMJD8Q96S16 334 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 IFT27Q9BW83 186 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 SYT4Q9H2B2 425 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 METTL17Q9H7H0 456 aaPredicted RBP7.57□□□□□ -1.2
LDB1-203ENST00000461873 ZNF665Q9H7R5 613 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 EMC7Q9NPA0 242 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 DCAF13Q9NV06 445 aaKnown RBP7.57□□□□□ -1.2
LDB1-203ENST00000461873 TBCCD1Q9NVR7 557 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 ADAM18Q9Y3Q7 739 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 UGT2A1Q9Y4X1 527 aa7.57□□□□□ -1.2
LDB1-203ENST00000461873 ANK3Q12955 4377 aaKnown RBP7.57□□□□□ -1.2
LDB1-203ENST00000461873 LOC100509620A0A075B734 347 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 IGKV1D-43A0A0B4J1Z2 117 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 OR6C6A6NF89 314 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 CDC42EP2O14613 210 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 FFAR1O14842 300 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 DNAJC8O75937 253 aaPredicted RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 NCR1O76036 304 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 DIRAS1O95057 198 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 IGHV1-46P01743 117 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 IRF2P14316 349 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 ZNF823P16415 610 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 GATA3P23771 443 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 RASSF2P50749 326 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 RAD23AP54725 363 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 LSM6P62312 80 aaKnown RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 MALLQ13021 153 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 MSMPQ1L6U9 139 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 DCAF12L2Q5VW00 463 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 RPL13AP3Q6NVV1 102 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 LEG1Q6P5S2 330 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 RBMS3Q6XE24 437 aaKnown RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 PHC2Q8IXK0 858 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 ZNF101Q8IZC7 436 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 PGAM4Q8N0Y7 254 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 LINC00471Q8N535 108 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 SPICQ8N5J4 248 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 LRRC75AQ8NAA5 344 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 FAM156AQ8NDB6 213 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 GNPDA2Q8TDQ7 276 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 PTP4A1Q93096 173 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 RASD2Q96D21 266 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 MARS2Q96GW9 593 aaKnown RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 LRGUKQ96M69 825 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 ZNF582Q96NG8 517 aaPredicted RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 DCLRE1CQ96SD1 692 aaKnown RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 HCAR1Q9BXC0 346 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 WNT5BQ9H1J7 359 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 GORASP2Q9H8Y8 452 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 SRA1Q9HD15 236 aaKnown RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 NDUFAF4Q9P032 175 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 ABCD2Q9UBJ2 740 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 ASH2LQ9UBL3 628 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 IL20RAQ9UHF4 553 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 COA3Q9Y2R0 106 aaPredicted RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 RRP15Q9Y3B9 282 aaKnown RBP7.56□□□□□ -1.2
LDB1-203ENST00000461873 WIPI2Q9Y4P8 454 aa7.56□□□□□ -1.2
LDB1-203ENST00000461873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.56□□□□□ -1.21e-6■□□□□ 8.7
LDB1-203ENST00000461873 LRRC30A6NM36 301 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 J3QW42 95 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 IFNL4K9M1U5 179 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 IMPA2O14732 288 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 FOXH1O75593 365 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 KRT36O76013 467 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 PPP1R3DO95685 299 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 SBK2P0C263 348 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 CTLA4P16410 223 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 SELEP16581 610 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 FPR2P25090 351 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 MPV17P39210 176 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 WNT5AP41221 380 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 SRP9P49458 86 aaKnown RBP7.55□□□□□ -1.2
LDB1-203ENST00000461873 TAF13Q15543 124 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 SPATS1Q496A3 300 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 MESTQ5EB52 335 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 FOXL2NBQ6ZUU3 175 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 RFPL4BQ6ZWI9 263 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 BPIFB2Q8N4F0 458 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 OR4C15Q8NGM1 316 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 OR1F12Q8NHA8 337 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 NANPQ8TBE9 248 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 POP5Q969H6 163 aaKnown RBP7.55□□□□□ -1.2
LDB1-203ENST00000461873 APOBEC3DQ96AK3 386 aaPredicted RBP7.55□□□□□ -1.2
LDB1-203ENST00000461873 NMD3Q96D46 503 aaKnown RBP7.55□□□□□ -1.2
LDB1-203ENST00000461873 CMBLQ96DG6 245 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 PITX2Q99697 317 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 SOX7Q9BT81 388 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 C19orf24Q9BVV8 132 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms