RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CRMP1Q14194 572 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 EFNB3Q15768 340 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SWI5Q1ZZU3 235 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 KDM4DQ6B0I6 523 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ACSM5Q6NUN0 579 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 IQCF1Q8N6M8 205 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZNF540Q8NDQ6 660 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 CPEB3Q8NE35 698 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SLC26A10Q8NG04 563 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 STMN2Q93045 179 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 OTULINQ96BN8 352 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 POM121L2Q96KW2 1035 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PKP2Q99959 881 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 RBM4BQ9BQ04 359 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PIMREGQ9BSJ6 248 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 RBM4Q9BWF3 364 aaKnown RBP11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 BCL2L14Q9BZR8 327 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ELOVL3Q9HB03 270 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SLC25A19Q9HC21 320 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 S100A14Q9HCY8 104 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PLEK2Q9NYT0 353 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ASH2LQ9UBL3 628 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 OAZ3Q9UMX2 235 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ORC6Q9Y5N6 252 aa11.41□□□□□ -0.58
RAB11FIP3-207ENST00000461009 C5orf49A4QMS7 147 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 DOK2O60496 412 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 GAAP10253 952 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 CCL2P13500 99 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SPI1P17947 270 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PYCR1P32322 319 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 EVX1P49640 407 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 UCP2P55851 309 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ADIPOQQ15848 244 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 SNAPC1Q16533 368 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 CARTPTQ16568 116 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 CYB5R2Q6BCY4 276 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 OR9Q1Q8NGQ5 310 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 C10orf105Q8TEF2 133 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 NMNAT2Q9BZQ4 307 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 PLK3Q9H4B4 646 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 ABCA2Q9BZC7 2435 aa11.4□□□□□ -0.58
RAB11FIP3-207ENST00000461009 NSD1Q96L73 2696 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 LOC100509620A0A075B734 347 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 LOC390937A0A1W2PQ73 354 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SAC3D1A6NKF1 404 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 H3BNX3 289 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 SURF4O15260 269 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 GPANK1O95872 356 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TFP02787 698 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 LCKP06239 509 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 IGFBP5P24593 272 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HTR5AP47898 357 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 PPOXP50336 477 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 KRTAP1-1Q07627 177 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ECH1Q13011 328 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 PTGES3Q15185 160 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MOGQ16653 247 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MEP1BQ16820 701 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MST1LQ2TV78 715 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TMEM249Q2WGJ8 235 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 CHRFAM7AQ494W8 412 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TMEM236Q5W0B7 351 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 RGS7BPQ6MZT1 257 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 VASH1Q7L8A9 365 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 OR51L1Q8NGJ5 315 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 IPCEF1Q8WWN9 437 aaPredicted RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 PTP4A1Q93096 173 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MRPL24Q96A35 216 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 C4orf45Q96LM5 186 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 DCLRE1CQ96SD1 692 aaKnown RBP11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 DYNLRB1Q9NP97 96 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TVP23BQ9NYZ1 205 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ATPIF1Q9UII2 106 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 GPR160Q9UJ42 338 aa11.39□□□□□ -0.59
RAB11FIP3-207ENST00000461009 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ARFGEF3Q5TH69 2177 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 OR6C6A6NF89 314 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 FAM183AA6NL82 134 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 RER1O15258 196 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 MITFO75030 526 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 GLCEO94923 617 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 BAG2O95816 211 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 GYPBP06028 91 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 FAM157BP0CG42 384 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 TUBG1P23258 451 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 GZMKP49863 264 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HIST1H3AP68431 136 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 ELFN2Q5R3F8 820 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HIST2H3PS2Q5TEC6 136 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 HIST2H3AQ71DI3 136 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 CPOQ8IVL8 374 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 PAQR4Q8N4S7 273 aaPredicted RBP11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 OR1J1Q8NGS3 322 aa11.38□□□□□ -0.59
RAB11FIP3-207ENST00000461009 OR6K6Q8NGW6 343 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms