RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 IGFBP5P24593 272 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 CSNK1A1P48729 337 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 RAB25P57735 213 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 TEKQ02763 1124 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.73□□□□□ -0.85
APTX-209ENST00000460940 SCN1BQ07699 218 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 FHL1Q13642 323 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 ACKR1Q16570 336 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 SHQ1Q6PI26 577 aaKnown RBP9.73□□□□□ -0.85
APTX-209ENST00000460940 ZER1Q7Z7L7 766 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 MEX3DQ86XN8 651 aaKnown RBP9.73□□□□□ -0.85
APTX-209ENST00000460940 YIPF7Q8N8F6 280 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 OR6N1Q8NGY5 312 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 ASB10Q8WXI3 467 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 GPX7Q96SL4 187 aaPredicted RBP9.73□□□□□ -0.85
APTX-209ENST00000460940 PITX2Q99697 317 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 EMC6Q9BV81 110 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 RNF121Q9H920 327 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 SMURF1Q9HCE7 757 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 NGBQ9NPG2 151 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 C14orf119Q9NWQ9 140 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 ELF5Q9UKW6 265 aaPredicted RBP9.73□□□□□ -0.85
APTX-209ENST00000460940 SIGLEC7Q9Y286 467 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 CELSR2Q9HCU4 2923 aa9.73□□□□□ -0.85
APTX-209ENST00000460940 ARRDC5A6NEK1 342 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 RAD51DO75771 328 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 HOXC12P31275 282 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 BLVRAP53004 296 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CD83Q01151 205 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TLE4Q04727 773 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 LGALS3BPQ08380 585 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CAMK2DQ13557 499 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 GALEQ14376 348 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 MELKQ14680 651 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 LAPTM4AQ15012 233 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TSC22D1Q15714 1073 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 GABRA6Q16445 453 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TIGD6Q17RP2 521 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CLVS2Q5SYC1 327 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CARD17Q5XLA6 110 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ANKRD34AQ69YU3 496 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 LAMTOR1Q6IAA8 161 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ZNF770Q6IQ21 691 aaPredicted RBP9.72□□□□□ -0.85
APTX-209ENST00000460940 PGBD2Q6P3X8 592 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ZNF600Q6ZNG1 722 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 LRRC75AQ8NAA5 344 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 FANK1Q8TC84 345 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 GNPDA2Q8TDQ7 276 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TMEM54Q969K7 222 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 MUCL1Q96DR8 90 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TNFRSF13CQ96RJ3 184 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 POLDIP3Q9BY77 421 aaKnown RBP9.72□□□□□ -0.85
APTX-209ENST00000460940 ULBP2Q9BZM5 246 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CRLF2Q9HC73 371 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 OBP2BQ9NPH6 170 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 PLCXD1Q9NUJ7 323 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 NDRG4Q9ULP0 352 aaKnown RBP9.72□□□□□ -0.85
APTX-209ENST00000460940 GMPPBQ9Y5P6 360 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CRYBG3Q68DQ2 2970 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 FAM221AA4D161 298 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 A6NIZ1 184 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 E9PQ18 207 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 PTP4A3O75365 173 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 THBDP07204 575 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CD14P08571 375 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 PGA4P0DJD7 388 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 PGA3P0DJD8 388 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TNFSF8P32971 234 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 RPL4P36578 427 aaKnown RBP9.72□□□□□ -0.85
APTX-209ENST00000460940 HAAOP46952 286 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 CTXN1P60606 82 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 RAP1BP61224 184 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 RPL27P61353 136 aaKnown RBP9.72□□□□□ -0.85
APTX-209ENST00000460940 RAP1AP62834 184 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 S100A12P80511 92 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TSPAN31Q12999 210 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 PPA1Q15181 289 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TAB1Q15750 504 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 MICAQ29983 383 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 TIMM50Q3ZCQ8 353 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 BEX5Q5H9J7 111 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ALKBH2Q6NS38 261 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 RPL13AP3Q6NVV1 102 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ANKRD16Q6P6B7 361 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 SMARCD3Q6STE5 483 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 KLHL24Q6TFL4 600 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 LINGO2Q7L985 606 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 HS3ST5Q8IZT8 346 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 OR1K1Q8NGR3 316 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 DCLRE1CQ96SD1 692 aaKnown RBP9.72□□□□□ -0.85
APTX-209ENST00000460940 ALG12Q9BV10 488 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 SRRQ9GZT4 340 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ERVK13-1Q9NX77 482 aa9.72□□□□□ -0.85
APTX-209ENST00000460940 ING3Q9NXR8 418 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms