RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 CCL3P10147 92 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 CD37P11049 281 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 SNRPBP14678 240 aaKnown RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 IL11P20809 199 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 CD82P27701 267 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 GUCA1AP43080 201 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 KIR2DL3P43628 341 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 H3F3AP84243 136 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 TMEM176BQ3YBM2 270 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 C10orf128Q5T292 105 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 BCL2L15Q5TBC7 163 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 PRAMEF20Q5VT98 475 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 RSBN1Q5VWQ0 802 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 DCXRQ7Z4W1 244 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 ZBTB8BQ8NAP8 495 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 OR2AJ1Q8NGZ0 328 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 DPAGT1Q9H3H5 408 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 LIN7BQ9HAP6 207 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 MED29Q9NX70 200 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 CYB5R1Q9UHQ9 305 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 NUBP2Q9Y5Y2 271 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 USP9XQ93008 2570 aaPredicted RBP12.56□□□□□ -0.4
ERCC3-205ENST00000460485 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 SDK2Q58EX2 2172 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 ACOT7O00154 380 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 AGRPO00253 132 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 SCGNO76038 276 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 DHFRP00374 187 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 PAHP00439 452 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 APOC1P02654 83 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 FAM157BP0CG42 384 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 PSKH1P11801 424 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 OTX2P32243 289 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
ERCC3-205ENST00000460485 GRB2P62993 217 aaKnown RBP12.55□□□□□ -0.4
ERCC3-205ENST00000460485 DBPQ10586 325 aaPredicted RBP12.55□□□□□ -0.4
ERCC3-205ENST00000460485 LY6DQ14210 128 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 OR7E24Q6IFN5 339 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 OR5H6Q8NGV6 325 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 YIPF5Q969M3 257 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 PTX4Q96A99 478 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 AMELYQ99218 206 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 GFI1Q99684 422 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 SLC25A18Q9H1K4 315 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 TAS2R8Q9NYW2 309 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 OR52A1Q9UKL2 312 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 PAIP2BQ9ULR5 123 aaKnown RBP12.55□□□□□ -0.4
ERCC3-205ENST00000460485 BOKQ9UMX3 212 aaPredicted RBP12.55□□□□□ -0.4
ERCC3-205ENST00000460485 RCE1Q9Y256 329 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
ERCC3-205ENST00000460485 A0A1W2PPK0 400 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 NPIPA2E9PIF3 369 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 NPIPA3F8WFD2 350 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 EEF1E1O43324 174 aaKnown RBP12.54□□□□□ -0.4
ERCC3-205ENST00000460485 MT-CO3P00414 261 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 ERCC1P07992 297 aaPredicted RBP12.54□□□□□ -0.4
ERCC3-205ENST00000460485 CYB561P49447 251 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 AGFG1P52594 562 aaKnown RBP12.54□□□□□ -0.4
ERCC3-205ENST00000460485 RAB11BQ15907 218 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 ACER2Q5QJU3 275 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 PDSS1Q5T2R2 415 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 CDH26Q8IXH8 852 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 CMTM4Q8IZR5 234 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 OR6M1Q8NGM8 313 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 RNF31Q96EP0 1072 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 NEDD4LQ96PU5 975 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 ABHD1Q96SE0 405 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 NPAS1Q99742 590 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 OR2B2Q9GZK3 357 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 G6PC2Q9NQR9 355 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 DIABLOQ9NR28 239 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 P4HTMQ9NXG6 502 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 NUFIP1Q9UHK0 495 aaKnown RBP12.54□□□□□ -0.4
ERCC3-205ENST00000460485 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 CACNA1CQ13936 2221 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
ERCC3-205ENST00000460485 TMEM269A0A1B0GVZ9 245 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 LOC107986453A0A1B0GWG9 222 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 PYCARD-AS1I3L0S3 204 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 SSX4O60224 188 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 KRT33AO76009 404 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 CELA2AP08217 269 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
ERCC3-205ENST00000460485 SFTPDP35247 375 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 FAUP35544 74 aaKnown RBP12.53□□□□□ -0.4
ERCC3-205ENST00000460485 SOX2P48431 317 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 CSNK1A1P48729 337 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 DNASE1L1P49184 302 aa12.53□□□□□ -0.4
ERCC3-205ENST00000460485 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
ERCC3-205ENST00000460485 CLDN6P56747 220 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms