RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 DOK2O60496 412 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 HPGDSO60760 199 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 CPN1P15169 458 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 THBS2P35442 1172 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 PPP3R1P63098 170 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 IFITM3Q01628 133 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 CHMP1BQ7LBR1 199 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 ZADH2Q8N4Q0 377 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 ACOT12Q8WYK0 555 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 BRD7Q9NPI1 651 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 FAM206AQ9NX38 181 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 WASF3Q9UPY6 502 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 CAMK2AQ9UQM7 478 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 V9GYH0 126 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 TRBV5-7A0A0A0MS05 114 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 SLC2A2P11168 524 aaPredicted RBP15.29■□□□□ 0.04
CDK11A-209ENST00000460465 SDHBP21912 280 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 DCTDP32321 178 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 MMP16P51512 607 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 MRPS34P82930 218 aaKnown RBP15.29■□□□□ 0.04
CDK11A-209ENST00000460465 TAF13Q15543 124 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 TUSC5Q8IXB3 177 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 TMEM106AQ96A25 262 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 CLEC4AQ9UMR7 237 aa15.29■□□□□ 0.04
CDK11A-209ENST00000460465 NCOA6Q14686 2063 aaPredicted RBP15.28■□□□□ 0.04
CDK11A-209ENST00000460465 NOTOA8MTQ0 251 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 MRPL33O75394 65 aaKnown RBP15.28■□□□□ 0.04
CDK11A-209ENST00000460465 HSD11B1P28845 292 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 BCL2L15Q5TBC7 163 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 RHOUQ7L0Q8 258 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 CPT1CQ8TCG5 803 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 DIRAS2Q96HU8 199 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 CALHM2Q9HA72 323 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 ANKRD61A6NGH8 418 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 DLL1O00548 723 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 IGHG3P01860 377 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 KCTD12Q96CX2 325 aaKnown RBP15.28■□□□□ 0.04
CDK11A-209ENST00000460465 GFI1Q99684 422 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 TCF7L1Q9HCS4 588 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 TMEM38BQ9NVV0 291 aa15.28■□□□□ 0.04
CDK11A-209ENST00000460465 PDCD5O14737 125 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 TBX1O43435 398 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 RAF1P04049 648 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 EPXP11678 715 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 CEACAM16Q2WEN9 425 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 RIPPLY2Q5TAB7 128 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 IGFL3Q6UXB1 125 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 STAC2Q6ZMT1 411 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 SLITRK2Q9H156 845 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 SLCO5A1Q9H2Y9 848 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 ZCCHC4Q9H5U6 513 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 BCO1Q9HAY6 547 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 GPR35Q9HC97 309 aa15.27■□□□□ 0.04
CDK11A-209ENST00000460465 LOC400499M0QZD8 3231 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 UPK1BO75841 260 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 ATF1P18846 271 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 NPR2P20594 1047 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 PSMA6P60900 246 aaKnown RBP15.27■□□□□ 0.03
CDK11A-209ENST00000460465 ZNF169Q14929 603 aaPredicted RBP15.27■□□□□ 0.03
CDK11A-209ENST00000460465 RNPS1Q15287 305 aaKnown RBP15.27■□□□□ 0.03
CDK11A-209ENST00000460465 TSPO2Q5TGU0 170 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 FAM27BQ5VT28 67 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 ZNF704Q6ZNC4 412 aaPredicted RBP15.27■□□□□ 0.03
CDK11A-209ENST00000460465 GJC3Q8NFK1 279 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 THRSPQ92748 146 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 SDHCQ99643 169 aaPredicted RBP15.27■□□□□ 0.03
CDK11A-209ENST00000460465 NIPAL2Q9H841 368 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 RNF122Q9H9V4 155 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 ABCB10Q9NRK6 738 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 DHDHQ9UQ10 334 aa15.27■□□□□ 0.03
CDK11A-209ENST00000460465 TRAV8-7A0A075B6U6 113 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 LOC107986453A0A1B0GWG9 222 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 ZNF724A8MTY0 619 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 IGHV3-9P01782 118 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 ISG15P05161 165 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 PRKXP51817 358 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 HIST1H3AP68431 136 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 ZNF79Q15937 498 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 HIST2H3PS2Q5TEC6 136 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 HIST2H3AQ71DI3 136 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 MCEMP1Q8IX19 187 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 ZNF433Q8N7K0 673 aaPredicted RBP15.26■□□□□ 0.03
CDK11A-209ENST00000460465 FBXO17Q96EF6 278 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 FOXB1Q99853 325 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 PBOV1Q9GZY1 135 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 PARPBPQ9NWS1 579 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 HHLA2Q9UM44 414 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 PCDHGA9Q9Y5G4 932 aaKnown RBP15.26■□□□□ 0.03
CDK11A-209ENST00000460465 P2RY10O00398 339 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 KRT33AO76009 404 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 WISP2O76076 250 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 PAHP00439 452 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 TTRP02766 147 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 UBCP0CG48 685 aaKnown RBP15.26■□□□□ 0.03
CDK11A-209ENST00000460465 B4GALT1P15291 398 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 ACHEP22303 614 aa15.26■□□□□ 0.03
CDK11A-209ENST00000460465 GRB2P62993 217 aaKnown RBP15.26■□□□□ 0.03
CDK11A-209ENST00000460465 CNIH2Q6PI25 160 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms