RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ATG5Q9H1Y0 275 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 CACNA1HO95180 2353 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 FRG2CA6NGY1 282 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 NUDT21O43809 227 aaKnown RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SNAPC5O75971 98 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 CSF2RBP32927 897 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SPOCK1Q08629 439 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF660Q6AZW8 331 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SPEM1Q8N4L4 309 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 OR52I2Q8NH67 350 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 OR1F2PQ96R84 312 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 PIPOXQ9P0Z9 390 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ABRACLQ9P1F3 81 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 DHDHQ9UQ10 334 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 UBE2QL1A1L167 161 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 VSTM2BA6NLU5 285 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 MAPK3P27361 379 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 BLOC1S1P78537 153 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ACSM1Q08AH1 577 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SNTB1Q13884 538 aaKnown RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF124Q15973 351 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 GUCA2BQ16661 112 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 Q499Y3 187 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 MESTQ5EB52 335 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SLC18B1Q6NT16 456 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 KCTD18Q6PI47 426 aaPredicted RBP13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SYS1Q8N2H4 156 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 OR4K17Q8NGC6 315 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 OR1N1Q8NGS0 311 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 NOX3Q9HBY0 568 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SDHAF3Q9NRP4 125 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 ICAM5Q9UMF0 924 aa13.88□□□□□ -0.19
LMNB1-203ENST00000460265 SHISA7A6NL88 538 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 UBL3O95164 117 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 DDAH2O95865 285 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 RNF224P0DH78 156 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 IFNGR1P15260 489 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 ANXA7P20073 488 aaKnown RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 RNF4P78317 190 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 FMODQ06828 376 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 PDZK1IP1Q13113 114 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 SGCAQ16586 387 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF227Q86WZ6 799 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF721Q8TF20 911 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 OR5B2Q96R09 309 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 LAT2Q9GZY6 243 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 GAREM1Q9H706 876 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 APMAPQ9HDC9 416 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 ST6GALNAC2Q9UJ37 374 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 IFITM5A6NNB3 132 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 GPRIN2O60269 458 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 KRT33AO76009 404 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 RIDAP52758 137 aaKnown RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 DCAF7P61962 342 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 GLO1Q04760 184 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 EGR4Q05215 589 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 NDUFAF7Q7L592 441 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 FAM46BQ96A09 425 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 KCNK15Q9H427 330 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 FARSAQ9Y285 508 aaKnown RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 EMC9Q9Y3B6 208 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 THADAQ6YHU6 1953 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 GDF9O60383 454 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 HLA-DOBP13765 273 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 C9orf152Q5JTZ5 239 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 KLHL24Q6TFL4 600 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 TMED4Q7Z7H5 227 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 CADM4Q8NFZ8 388 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 TIMP4Q99727 224 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 C7orf50Q9BRJ6 194 aaKnown RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 ELL3Q9HB65 397 aaPredicted RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 ANKRD10Q9NXR5 420 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 HAO2Q9NYQ3 351 aa13.87□□□□□ -0.19
LMNB1-203ENST00000460265 AKAP7Q9P0M2 348 aaPredicted RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 MRM2Q9UI43 246 aaKnown RBP13.87□□□□□ -0.19
LMNB1-203ENST00000460265 A0A1W2PNR3 127 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 A8MVM7 634 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 NPIPB9F8W1W9 429 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 ACHEP22303 614 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 SLC2A5P22732 501 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 ACY1Q03154 408 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 CFHR1Q03591 330 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 SLC35D3Q5M8T2 416 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 PPP1R3BQ86XI6 285 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 TMEM156Q8N614 296 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 ELP5Q8TE02 316 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 HIF3AQ9Y2N7 669 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 PRRC2CQ9Y520 2896 aaKnown RBP13.86□□□□□ -0.19
LMNB1-203ENST00000460265 PCNX3Q9H6A9 2034 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 H2BFMP0C1H6 154 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 P2RX1P51575 399 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 CCL7P80098 99 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 INPP5JQ15735 1006 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-203ENST00000460265 PWWP2BQ6NUJ5 590 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 STAC2Q6ZMT1 411 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 OR2G2Q8NGZ5 317 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 ZNF524Q96C55 264 aa13.86□□□□□ -0.19
LMNB1-203ENST00000460265 ZC3H10Q96K80 434 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms