RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 USP43Q70EL4 1123 aa19.27■□□□□ 0.68
PTPN4-207ENST00000460162 C7orf34Q96L11 122 aa19.27■□□□□ 0.68
PTPN4-207ENST00000460162 DHRS1Q96LJ7 313 aa19.27■□□□□ 0.68
PTPN4-207ENST00000460162 POFUT1Q9H488 388 aa19.27■□□□□ 0.68
PTPN4-207ENST00000460162 DCAF13Q9NV06 445 aaKnown RBP19.27■□□□□ 0.68
PTPN4-207ENST00000460162 AURKCQ9UQB9 309 aa19.27■□□□□ 0.68
PTPN4-207ENST00000460162 DYSFO75923 2080 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 TRBV4-1A0A0J9YWV2 114 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 OR6C6A6NF89 314 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 SOCS2O14508 198 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 TXNDC12O95881 172 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 TNFRSF1AP19438 455 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 RPS6KA3P51812 740 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 FXYD6P3P58550 94 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 HILS1P60008 231 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 SPRNQ5BIV9 151 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 GLYATQ6IB77 296 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 PGM2L1Q6PCE3 622 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 DPY19L2P2Q6ZN68 376 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 RERGLQ9H628 205 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 COA3Q9Y2R0 106 aaPredicted RBP19.26■□□□□ 0.67
PTPN4-207ENST00000460162 NPTNQ9Y639 398 aa19.26■□□□□ 0.67
PTPN4-207ENST00000460162 NBEAL1Q6ZS30 2694 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 GMNNO75496 209 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 IGHV2-70P01814 119 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 RGS6P49758 472 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 SEC23BQ15437 767 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 DNM1P34Q6PK57 102 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 PTCHD4Q6ZW05 846 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 FAM86B1Q8N7N1 296 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 OR1F12Q8NHA8 337 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 ST7LQ8TDW4 575 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 SAMD8Q96LT4 415 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 DCLRE1CQ96SD1 692 aaKnown RBP19.25■□□□□ 0.67
PTPN4-207ENST00000460162 NUAK2Q9H093 628 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 TMEM106BQ9NUM4 274 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 UBAP1Q9NZ09 502 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 IL20RAQ9UHF4 553 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 PCDHB10Q9UN67 800 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 POLR1DQ9Y2S0 133 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 IER3IP1Q9Y5U9 82 aa19.25■□□□□ 0.67
PTPN4-207ENST00000460162 PPIAL4EA0A075B759 164 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 PPIAL4CA0A0B4J2A2 164 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 UNC119BA6NIH7 251 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 PPIAL4DF5H284 164 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 SURF4O15260 269 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 PPIAL4FP0DN26 164 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 KRT72Q14CN4 511 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 KCNMB1Q16558 191 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 SMARCD3Q6STE5 483 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 Q6ZR03 302 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 SPICQ8N5J4 248 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 ZNF283Q8N7M2 679 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 OR2Z1Q8NG97 314 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 NANPQ8TBE9 248 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 FANK1Q8TC84 345 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 HAVCR1Q96D42 359 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 CMBLQ96DG6 245 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 JMJD8Q96S16 334 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 ELAC2Q9BQ52 826 aaKnown RBP19.24■□□□□ 0.67
PTPN4-207ENST00000460162 FUZQ9BT04 418 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 GORASP2Q9H8Y8 452 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 ADA2Q9NZK5 511 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 IL19Q9UHD0 177 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 STARD10Q9Y365 291 aa19.24■□□□□ 0.67
PTPN4-207ENST00000460162 IMPA2O14732 288 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 FOXH1O75593 365 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 RAC2P15153 192 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 CRABP1P29762 137 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 TMEM155Q4W5P6 130 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 CCDC92Q53HC0 331 aaPredicted RBP19.23■□□□□ 0.67
PTPN4-207ENST00000460162 ZNF771Q7L3S4 317 aaPredicted RBP19.23■□□□□ 0.67
PTPN4-207ENST00000460162 SLC7A6Q92536 515 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 HDHD2Q9H0R4 259 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 DCAF16Q9NXF7 216 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 MAGEL2Q9UJ55 1249 aa19.23■□□□□ 0.67
PTPN4-207ENST00000460162 TENM1Q9UKZ4 2725 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 RER1O15258 196 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 DIRAS1O95057 198 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 SEMG1P04279 462 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 CDKN2AP42771 156 aaKnown RBP19.22■□□□□ 0.67
PTPN4-207ENST00000460162 SMIM11AP58511 58 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 LCN2P80188 198 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 OTPQ5XKR4 325 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 C1orf94Q6P1W5 598 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 C12orf54Q6X4T0 127 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 KLHL36Q8N4N3 616 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 RNF148Q8N7C7 305 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 PTP4A1Q93096 173 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 COQ7Q99807 217 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 SUCNR1Q9BXA5 334 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 C7orf69Q9H7B7 122 aa19.22■□□□□ 0.67
PTPN4-207ENST00000460162 TRIM77I1YAP6 450 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 RGS9O75916 674 aaPredicted RBP19.21■□□□□ 0.67
PTPN4-207ENST00000460162 PPP1R3DO95685 299 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 FSHBP01225 129 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 ADRA2CP18825 462 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 ERFP50548 548 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 BTG1P62324 171 aa19.21■□□□□ 0.67
PTPN4-207ENST00000460162 HIST1H3AP68431 136 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms