RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 GPX4P36969 197 aaPredicted RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 MRPL19P49406 292 aaKnown RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 RAB9AP51151 201 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CLDN8P56748 225 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 HERVK_113P61574 105 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 MAB21L1Q13394 359 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 WDR43Q15061 677 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 TMEM150AQ86TG1 271 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 Q8N9L7 120 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 BPIFCQ8NFQ6 507 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 OR10J6PQ8NGY7 276 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CLHC1Q8NHS4 586 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 KIAA1143Q96AT1 154 aaPredicted RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 EEF1AKMT3Q96AZ1 226 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 EXOSC8Q96B26 276 aaKnown RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CREB3L1Q96BA8 519 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 ZBED3Q96IU2 234 aaPredicted RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CCNB1IP1Q9NPC3 277 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 TMEM9BQ9NQ34 198 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 TUBG2Q9NRH3 451 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 SDHAF3Q9NRP4 125 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 SLC17A4Q9Y2C5 497 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CARMIL3Q8ND23 1372 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.53□□□□□ -1.84
CCDC50-203ENST00000460064 A0A096LNJ9 63 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 LYRM9A8MSI8 78 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 GABARAPO95166 117 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 KLHL2O95198 593 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 RETP07949 1114 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 RAB3BP20337 219 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 GSTM3P21266 225 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 STOMP27105 288 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 NAMPTP43490 491 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 CSNK1EP49674 416 aaKnown RBP3.53□□□□□ -1.84
CCDC50-203ENST00000460064 RND2P52198 227 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 GINS1Q14691 196 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 OR7A5Q15622 319 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 KLHL40Q2TBA0 621 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 HSDL1Q3SXM5 330 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 HIKESHIQ53FT3 197 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 HSP90AA4PQ58FG1 418 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 THEM4Q5T1C6 240 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 AGBL2Q5U5Z8 902 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 DNAJC24Q6P3W2 148 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 MBOAT1Q6ZNC8 495 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 NCCRP1Q6ZVX7 275 aaPredicted RBP3.53□□□□□ -1.84
CCDC50-203ENST00000460064 LINC01551Q86U37 167 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 ENTHD1Q8IYW4 607 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 SYCE1Q8N0S2 351 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 RNF10Q8N5U6 811 aaKnown RBP3.53□□□□□ -1.84
CCDC50-203ENST00000460064 OR2A1Q8NGT9 310 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF596Q8TC21 504 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 BMFQ96LC9 184 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 WFIKKN1Q96NZ8 548 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 FRMD8P1Q9BZ68 369 aaPredicted RBP3.53□□□□□ -1.84
CCDC50-203ENST00000460064 TPK1Q9H3S4 243 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 TDRD3Q9H7E2 651 aaKnown RBP3.53□□□□□ -1.84
CCDC50-203ENST00000460064 AUNIPQ9H7T9 357 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 RETNQ9HD89 108 aa3.53□□□□□ -1.84
CCDC50-203ENST00000460064 GABRR3A8MPY1 467 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 SMKR1H3BMG3 65 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 ZW10O43264 779 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 FKBP6O75344 327 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 TGM6O95932 706 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 GLAP06280 429 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 OR5H8P0DN80 308 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 CCNB1P14635 433 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 F2RP25116 425 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 BLVRAP53004 296 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 CRISP1P54107 249 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 UCNP55089 124 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 UBE2IP63279 158 aaKnown RBP3.52□□□□□ -1.85
CCDC50-203ENST00000460064 TPM4P67936 248 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 MRPS15P82914 257 aaKnown RBP3.52□□□□□ -1.85
CCDC50-203ENST00000460064 MADCAM1Q13477 382 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 CAPRIN1Q14444 709 aaKnown RBP3.52□□□□□ -1.85
CCDC50-203ENST00000460064 TRAM2Q15035 370 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 NCF4Q15080 339 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 PSMD5Q16401 504 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 XKR4Q5GH76 650 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 KATNAL2Q8IYT4 538 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 ZFP41Q8N8Y5 198 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 OR10G4Q8NGN3 311 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 CDKL2Q92772 493 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 ZNF285Q96NJ3 590 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 XPO6Q96QU8 1125 aaKnown RBP3.52□□□□□ -1.85
CCDC50-203ENST00000460064 TEKT3Q9BXF9 490 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 SLC25A2Q9BXI2 301 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 VCX3BQ9H321 246 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 PSTPIP2Q9H939 334 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 BEX1Q9HBH7 125 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 TREM1Q9NP99 234 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 FAM49BQ9NUQ9 324 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 PEF1Q9UBV8 284 aaKnown RBP3.52□□□□□ -1.85
CCDC50-203ENST00000460064 PSG8Q9UQ74 426 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 CAMTA1Q9Y6Y1 1673 aa3.52□□□□□ -1.85
CCDC50-203ENST00000460064 MN1Q10571 1320 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms