RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 MSR1P21757 451 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 CD40P25942 277 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 CDAP32320 146 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 SLC15A1P46059 708 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 MTNR1AP48039 350 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 LSM6P62312 80 aaKnown RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 ZNF91Q05481 1191 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 POU4F2Q12837 409 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 ANKRD16Q6P6B7 361 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 ZNF813Q6ZN06 617 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 P2RY8Q86VZ1 359 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 C11orf40Q8WZ69 217 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 HTRA1Q92743 480 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 NABP1Q96AH0 204 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 USB1Q9BQ65 265 aaKnown RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 WACQ9BTA9 647 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 NELFAQ9H3P2 528 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 SEC61A2Q9H9S3 476 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 SLC17A5Q9NRA2 495 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 MRPL22Q9NWU5 206 aaKnown RBP13.53□□□□□ -0.24
SDF4-204ENST00000459994 PCDHGB5Q9Y5G0 923 aa13.53□□□□□ -0.24
SDF4-204ENST00000459994 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.24
SDF4-204ENST00000459994 TLN2Q9Y4G6 2542 aa13.52□□□□□ -0.24
SDF4-204ENST00000459994 TVP23AA6NH52 213 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 MPZL1O95297 269 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 FARS2O95363 451 aaKnown RBP13.52□□□□□ -0.25
SDF4-204ENST00000459994 HLA-DQA2P01906 255 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 SCG5P05408 212 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 OR8G3PP0DMU2 310 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 DBTP11182 482 aaKnown RBP13.52□□□□□ -0.25
SDF4-204ENST00000459994 NUDT6P53370 316 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 SGCAQ16586 387 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 PCK2Q16822 640 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 CLEC12BQ2HXU8 276 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 HIKESHIQ53FT3 197 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 KLHL22Q53GT1 634 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 C1QTNF12Q5T7M4 302 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 OR7E24Q6IFN5 339 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 C11orf71Q6IPW1 123 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 DTX2Q86UW9 622 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 CCDC36Q8IYA8 594 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 SLC22A24Q8N4F4 322 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 RNFT2Q96EX2 444 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 FOXN4Q96NZ1 517 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 INTS14Q96SY0 518 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 AMBNQ9NP70 447 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 COMMD3-BMI1R4GMX3 469 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 CSPG4Q6UVK1 2322 aa13.52□□□□□ -0.25
SDF4-204ENST00000459994 IRGMA1A4Y4 181 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 EFCAB10A6NFE3 127 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 RNF223E7ERA6 249 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 SLC1A7O00341 560 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 GPANK1O95872 356 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 CST2P09228 141 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 SBK2P0C263 348 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 PIPP12273 146 aaPredicted RBP13.51□□□□□ -0.25
SDF4-204ENST00000459994 B4GALT1P15291 398 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 ZNF823P16415 610 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 PCSK6P29122 969 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 ENTPD1P49961 510 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 TUBA1BP68363 451 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 TUBA4AP68366 448 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 RAB40BQ12829 278 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 RBM48Q5RL73 367 aaKnown RBP13.51□□□□□ -0.25
SDF4-204ENST00000459994 LYPD4Q6UWN0 246 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 TUBA1AQ71U36 451 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 SLC16A9Q7RTY1 509 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 DPPA2Q7Z7J5 298 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 C17orf78Q8N4C9 275 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 BPIFB6Q8NFQ5 453 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 OR10H5Q8NGA6 315 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 CNN2Q99439 309 aaKnown RBP13.51□□□□□ -0.25
SDF4-204ENST00000459994 MNTQ99583 582 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 YIPF3Q9GZM5 350 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 ADGRL4Q9HBW9 690 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 FKBP14Q9NWM8 211 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 CNOT2Q9NZN8 540 aaKnown RBP13.51□□□□□ -0.25
SDF4-204ENST00000459994 PSORS1C1Q9UIG5 152 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 EXOGQ9Y2C4 368 aaKnown RBP13.51□□□□□ -0.25
SDF4-204ENST00000459994 TPRKBQ9Y3C4 175 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 PCDHGB1Q9Y5G3 927 aa13.51□□□□□ -0.25
SDF4-204ENST00000459994 C12orf71A8MTZ7 269 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 INAFM1C9JVW0 142 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 ZNF593O00488 134 aaPredicted RBP13.5□□□□□ -0.25
SDF4-204ENST00000459994 XPNPEP2O43895 674 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 FAM20BO75063 409 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 TMCC2O75069 709 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 ENDOGQ14249 297 aaKnown RBP13.5□□□□□ -0.25
SDF4-204ENST00000459994 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 SLC22A25Q6T423 547 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 KLHL24Q6TFL4 600 aa13.5□□□□□ -0.25
SDF4-204ENST00000459994 UGT2A3Q6UWM9 527 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms