RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZNF250P15622 560 aa16■□□□□ 0.15
USP39-209ENST00000458268 PRKACGP22612 351 aa16■□□□□ 0.15
USP39-209ENST00000458268 MAGEB1P43366 347 aa16■□□□□ 0.15
USP39-209ENST00000458268 CRMP1Q14194 572 aa16■□□□□ 0.15
USP39-209ENST00000458268 TSTQ16762 297 aaKnown RBP16■□□□□ 0.15
USP39-209ENST00000458268 CCDC92Q53HC0 331 aaPredicted RBP16■□□□□ 0.15
USP39-209ENST00000458268 C1orf146Q5VVC0 180 aa16■□□□□ 0.15
USP39-209ENST00000458268 LYPD4Q6UWN0 246 aa16■□□□□ 0.15
USP39-209ENST00000458268 SLC37A3Q8NCC5 494 aa16■□□□□ 0.15
USP39-209ENST00000458268 NPEPL1Q8NDH3 523 aa16■□□□□ 0.15
USP39-209ENST00000458268 OR2AJ1Q8NGZ0 328 aa16■□□□□ 0.15
USP39-209ENST00000458268 OR1F12Q8NHA8 337 aa16■□□□□ 0.15
USP39-209ENST00000458268 BPESC1Q9GZL8 116 aa16■□□□□ 0.15
USP39-209ENST00000458268 NARFLQ9H6Q4 476 aa16■□□□□ 0.15
USP39-209ENST00000458268 ZNF556Q9HAH1 456 aa16■□□□□ 0.15
USP39-209ENST00000458268 MYOZ1Q9NP98 299 aaPredicted RBP16■□□□□ 0.15
USP39-209ENST00000458268 HINT3Q9NQE9 182 aaKnown RBP16■□□□□ 0.15
USP39-209ENST00000458268 SLCO1C1Q9NYB5 712 aa16■□□□□ 0.15
USP39-209ENST00000458268 KIF17Q9P2E2 1029 aa16■□□□□ 0.15
USP39-209ENST00000458268 LHFPL6Q9Y693 200 aa16■□□□□ 0.15
USP39-209ENST00000458268 TCRBV3S1A0A5B6 114 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 RIIAD1A6NNX1 92 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 TIMM8AO60220 97 aaPredicted RBP15.99■□□□□ 0.15
USP39-209ENST00000458268 CDC14BO60729 498 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 IFNGP01579 166 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 TFP02787 698 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 MT-ND5P03915 603 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 ZNF823P16415 610 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 USF1P22415 310 aaPredicted RBP15.99■□□□□ 0.15
USP39-209ENST00000458268 RPS27P42677 84 aaKnown RBP15.99■□□□□ 0.15
USP39-209ENST00000458268 NR4A2P43354 598 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 CCL8P80075 99 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 ATG16L2Q8NAA4 619 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 GJC3Q8NFK1 279 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 SLC26A10Q8NG04 563 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 OR6K6Q8NGW6 343 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 OR2T4Q8NH00 348 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 KLF14Q8TD94 323 aaPredicted RBP15.99■□□□□ 0.15
USP39-209ENST00000458268 SNX18Q96RF0 628 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 PITX2Q99697 317 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 WACQ9BTA9 647 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 POFUT1Q9H488 388 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 KLHL21Q9UJP4 597 aa15.99■□□□□ 0.15
USP39-209ENST00000458268 PLSCR5A0PG75 271 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 NDUFS8O00217 210 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 SPRY3O43610 288 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 CIB2O75838 187 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 NCR1O76036 304 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 COX5BP10606 129 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 TMEM249Q2WGJ8 235 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 LNX2Q8N448 690 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 SLCO4A1Q96BD0 722 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 MARS2Q96GW9 593 aaKnown RBP15.98■□□□□ 0.15
USP39-209ENST00000458268 MED20Q9H944 212 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 PTTG3PQ9NZH4 202 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 DNAJB9Q9UBS3 223 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 BAIAP2Q9UQB8 552 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 ABCA1O95477 2261 aa15.98■□□□□ 0.15
USP39-209ENST00000458268 IGLV3-9A0A075B6K5 115 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 IGHV4-61A0A0C4DH41 118 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 FAM183AA6NL82 134 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 C17orf100A8MU93 164 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 SPARCP09486 303 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 CLUP10909 449 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 ZNF16P17020 682 aaPredicted RBP15.97■□□□□ 0.15
USP39-209ENST00000458268 ZNF3P17036 446 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 ZNF81P51508 661 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 KRTAP1-1Q07627 177 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 LOXL1Q08397 574 aaPredicted RBP15.97■□□□□ 0.15
USP39-209ENST00000458268 KCNMB1Q16558 191 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 MOGQ16653 247 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 ELFN2Q5R3F8 820 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 CFAP77Q6ZQR2 320 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 ZBTB46Q86UZ6 589 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 ZNRF4Q8WWF5 429 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 HDHD2Q9H0R4 259 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 DECR2Q9NUI1 292 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 STARD10Q9Y365 291 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 ZANQ9Y493 2812 aa15.97■□□□□ 0.15
USP39-209ENST00000458268 YLPM1P49750 1951 aaKnown RBP15.96■□□□□ 0.15
USP39-209ENST00000458268 A0A096LNT2 108 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 LRP5LA4QPB2 252 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 OR6C6A6NF89 314 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 F5H5K5 113 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 DEAF1O75398 565 aaPredicted RBP15.96■□□□□ 0.15
USP39-209ENST00000458268 HOXB6P17509 224 aaKnown RBP15.96■□□□□ 0.15
USP39-209ENST00000458268 COL8A2P25067 703 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 CCNIQ14094 377 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 GK3PQ14409 553 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 SLC18B1Q6NT16 456 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 CCDC121Q6ZUS5 278 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 OR5AS1Q8N127 324 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 ZNF786Q8N393 782 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 MSL2Q9HCI7 577 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 MRPL22Q9NWU5 206 aaKnown RBP15.96■□□□□ 0.15
USP39-209ENST00000458268 TREM2Q9NZC2 230 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 HIVEP2P31629 2446 aa15.96■□□□□ 0.15
USP39-209ENST00000458268 VWC2LB2RUY7 222 aa15.95■□□□□ 0.14
USP39-209ENST00000458268 PPIHO43447 177 aaKnown RBP15.95■□□□□ 0.14
USP39-209ENST00000458268 CD5LO43866 347 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms