RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PATZ1Q9HBE1 687 aaKnown RBP13.49□□□□□ -0.25
GPC1-206ENST00000455111 VSX1Q9NZR4 365 aaPredicted RBP13.49□□□□□ -0.25
GPC1-206ENST00000455111 NDUFAF4Q9P032 175 aa13.49□□□□□ -0.25
GPC1-206ENST00000455111 ABCD2Q9UBJ2 740 aa13.49□□□□□ -0.25
GPC1-206ENST00000455111 NDRG4Q9ULP0 352 aaKnown RBP13.49□□□□□ -0.25
GPC1-206ENST00000455111 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
GPC1-206ENST00000455111 ENPP4Q9Y6X5 453 aa13.49□□□□□ -0.25
GPC1-206ENST00000455111 TRBV4-1A0A0J9YWV2 114 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 C12orf71A8MTZ7 269 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 SLC22A2O15244 555 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 RER1O15258 196 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 MLNRO43193 412 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 WIPF1O43516 503 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 SGCEO43556 437 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 VIMP08670 466 aaKnown RBP13.48□□□□□ -0.25
GPC1-206ENST00000455111 SBK2P0C263 348 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 LIPAP38571 399 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 PRSS12P56730 875 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 UBA52P62987 128 aaKnown RBP13.48□□□□□ -0.25
GPC1-206ENST00000455111 ACTG1P63261 375 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 HIST1H3AP68431 136 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
GPC1-206ENST00000455111 HIST2H3PS2Q5TEC6 136 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 HIST2H3AQ71DI3 136 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 LRRC28Q86X40 367 aaPredicted RBP13.48□□□□□ -0.25
GPC1-206ENST00000455111 C1orf174Q8IYL3 243 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 OR2Z1Q8NG97 314 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
GPC1-206ENST00000455111 SAMD8Q96LT4 415 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 DIRC2Q96SL1 478 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 NUAK2Q9H093 628 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 GRHPRQ9UBQ7 328 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 ZNF69Q9UC07 566 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 CGGBP1Q9UFW8 167 aaPredicted RBP13.48□□□□□ -0.25
GPC1-206ENST00000455111 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 TRRAPQ9Y4A5 3859 aa13.48□□□□□ -0.25
GPC1-206ENST00000455111 MEGF8Q7Z7M0 2845 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 PPIAL4CA0A0B4J2A2 164 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 A8MXK9 166 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 SLC16A7O60669 478 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 SEMG1P04279 462 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 SELEP16581 610 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 ZNF12P17014 697 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 SDHAP31040 664 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 RPL4P36578 427 aaKnown RBP13.47□□□□□ -0.25
GPC1-206ENST00000455111 PMELP40967 661 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 MMP16P51512 607 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 ARHGDIAP52565 204 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 AQP6Q13520 282 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 KCNMB1Q16558 191 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 AWAT1Q58HT5 328 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 C1orf94Q6P1W5 598 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 OR5AS1Q8N127 324 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 NPEPL1Q8NDH3 523 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 ZNF420Q8TAQ5 688 aaPredicted RBP13.47□□□□□ -0.25
GPC1-206ENST00000455111 NANPQ8TBE9 248 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 DHRS1Q96LJ7 313 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 OR2V2Q96R30 315 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 EGLN1Q9GZT9 426 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 GCM1Q9NP62 436 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 INSIG2Q9Y5U4 225 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 IER3IP1Q9Y5U9 82 aa13.47□□□□□ -0.25
GPC1-206ENST00000455111 IGLV1-36A0A0B4J1U3 117 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 A0A1W2PRQ8 180 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 TMEM178BH3BS89 294 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 TRIM77I1YAP6 450 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 SOCS2O14508 198 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 ZNF205O95201 554 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 TXNDC12O95881 172 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 BTG1P62324 171 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 SCRN3Q0VDG4 424 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 ZNF154Q13106 437 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 DGCR6Q14129 220 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 TMEM155Q4W5P6 130 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 OR2T2Q6IF00 324 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 HACD2Q6Y1H2 254 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 ARPINQ7Z6K5 226 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 NAA40Q86UY6 237 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 SIGLECL1Q8N7X8 197 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 OR10AD1Q8NGE0 317 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 OR1F12Q8NHA8 337 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 RSRC1Q96IZ7 334 aaKnown RBP13.46□□□□□ -0.25
GPC1-206ENST00000455111 DUX5Q96PT3 197 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 WACQ9BTA9 647 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 RBM4Q9BWF3 364 aaKnown RBP13.46□□□□□ -0.25
GPC1-206ENST00000455111 SUCNR1Q9BXA5 334 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 MYLK2Q9H1R3 596 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 ANKRD19PQ9H560 264 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 MRGBPQ9NV56 204 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 ARGLU1Q9NWB6 273 aaPredicted RBP13.46□□□□□ -0.25
GPC1-206ENST00000455111 PLEK2Q9NYT0 353 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 PTTG3PQ9NZH4 202 aa13.46□□□□□ -0.25
GPC1-206ENST00000455111 IL19Q9UHD0 177 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms