RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 A0A1B0GVI7 797 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 CCR9P51686 369 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 PLGLB1Q02325 96 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ZFP69Q49AA0 526 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 GLYATL3Q5SZD4 288 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 TMEM244Q5VVB8 128 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 CFAP77Q6ZQR2 320 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ABHD12BQ7Z5M8 362 aaPredicted RBP12.14□□□□□ -0.47
CLK3-203ENST00000454830 DEFB124Q8NES8 71 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 OR52I2Q8NH67 350 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 OR6X1Q8NH79 312 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ST7LQ8TDW4 575 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 KCNJ15Q99712 375 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 DDA1Q9BW61 102 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ATG5Q9H1Y0 275 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 DPAGT1Q9H3H5 408 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ALG5Q9Y673 324 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 HSPB2A8KAH6 182 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 HSPB2Q16082 182 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 FCAMRQ8WWV6 532 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ASB5Q8WWX0 329 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ITFG2Q969R8 447 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 UPRTQ96BW1 309 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 B3GNT4Q9C0J1 378 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 PAIP2BQ9ULR5 123 aaKnown RBP12.14□□□□□ -0.47
CLK3-203ENST00000454830 SVILO95425 2214 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 A0A1W2PNU3 283 aaPredicted RBP12.14□□□□□ -0.47
CLK3-203ENST00000454830 GJE1A6NN92 205 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 KRT33AO76009 404 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 ZNF20P17024 532 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 FKBP2P26885 142 aaKnown RBP12.14□□□□□ -0.47
CLK3-203ENST00000454830 RAC1P63000 192 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 PLA2G7Q13093 441 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 CHMP1BQ7LBR1 199 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 LRRTM1Q86UE6 522 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 OR51E1Q8TCB6 317 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 THRSPQ92748 146 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 YIPF5Q969M3 257 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 SLC25A38Q96DW6 304 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 LIN37Q96GY3 246 aaPredicted RBP12.14□□□□□ -0.47
CLK3-203ENST00000454830 HES7Q9BYE0 225 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 GLTPQ9NZD2 209 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 KLK11Q9UBX7 282 aa12.14□□□□□ -0.47
CLK3-203ENST00000454830 SELENOPP49908 381 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 TGIF1Q15583 401 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 STPG1Q5TH74 334 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 FAM57BQ71RH2 274 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 UTP23Q9BRU9 249 aaKnown RBP12.13□□□□□ -0.47
CLK3-203ENST00000454830 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
CLK3-203ENST00000454830 PLEKHA1Q9HB21 404 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 DIABLOQ9NR28 239 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 SLC5A6Q9Y289 635 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 ETV2O00321 342 aaPredicted RBP12.13□□□□□ -0.47
CLK3-203ENST00000454830 AQP8O94778 261 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 DHFRP00374 187 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 OR13C9Q8NGT0 318 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 MRPL13Q9BYD1 178 aaKnown RBP12.13□□□□□ -0.47
CLK3-203ENST00000454830 PBOV1Q9GZY1 135 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 RANGRFQ9HD47 186 aaPredicted RBP12.13□□□□□ -0.47
CLK3-203ENST00000454830 PRRC2CQ9Y520 2896 aaKnown RBP12.13□□□□□ -0.47
CLK3-203ENST00000454830 SPAARA0A1B0GVQ0 90 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 IGHV3-9P01782 118 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 ITGA5P08648 1049 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 ATAD3CQ5T2N8 411 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 ATP1A1-AS1Q5TC04 95 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 CLEC1AQ8NC01 280 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 OR9K2Q8NGE7 335 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 RNF133Q8WVZ7 376 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 SPACA5Q96QH8 159 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 DEPPQ9NTK1 212 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 CYB5R1Q9UHQ9 305 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 LHFPL6Q9Y693 200 aa12.13□□□□□ -0.47
CLK3-203ENST00000454830 TRBV5-7A0A0A0MS05 114 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 ZNF878C9JN71 531 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 PMS2P2O95744 297 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 CALCBP10092 127 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 SRD5A2P31213 254 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 CD96P40200 585 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 MNDAP41218 407 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 FAAP20Q6NZ36 180 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 BAIAP2L2Q6UXY1 529 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 RPS4Y2Q8TD47 263 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 TRIM63Q969Q1 353 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 FAM46BQ96A09 425 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 ZNF416Q9BWM5 594 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 SRXN1Q9BYN0 137 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 EXO5Q9H790 373 aa12.12□□□□□ -0.47
CLK3-203ENST00000454830 ZMAT3Q9HA38 289 aaKnown RBP12.12□□□□□ -0.47
CLK3-203ENST00000454830 NEK6Q9HC98 313 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms