RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ESRRGP62508 458 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 PPP2R2BQ00005 443 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 GINS1Q14691 196 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 TEX30Q5JUR7 227 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 ELFN2Q5R3F8 820 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 MBNL2Q5VZF2 373 aaKnown RBP12.15□□□□□ -0.46
HDAC4-205ENST00000454542 AMIGO2Q86SJ2 522 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 OR10H5Q8NGA6 315 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 MARS2Q96GW9 593 aaKnown RBP12.15□□□□□ -0.46
HDAC4-205ENST00000454542 DCLRE1CQ96SD1 692 aaKnown RBP12.15□□□□□ -0.46
HDAC4-205ENST00000454542 SYT3Q9BQG1 590 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 TBCCD1Q9NVR7 557 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 OAZ3Q9UMX2 235 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 RTTNQ86VV8 2226 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 M0R233 179 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 CLPTM1O96005 669 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 HMGN1P05114 100 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 GYPBP06028 91 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 CCNOP22674 350 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 POU1F1P28069 291 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 CENPAP49450 140 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 BLVRAP53004 296 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 CRISP1P54107 249 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 KLF3P57682 345 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-205ENST00000454542 CORO6Q6QEF8 472 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 UNQ6126/PRO20091Q6UXV3 157 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 LINC00346Q8IVM7 164 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 OR51L1Q8NGJ5 315 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 OR10S1Q8NGN2 331 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 IPCEF1Q8WWN9 437 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-205ENST00000454542 PTP4A1Q93096 173 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 MAP6Q96JE9 813 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 C18orf12Q96KH6 178 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 C4orf45Q96LM5 186 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 RAB3IPQ96QF0 476 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-205ENST00000454542 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 OR51B6Q9H340 312 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 ELOVL3Q9HB03 270 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 HINT3Q9NQE9 182 aaKnown RBP12.14□□□□□ -0.47
HDAC4-205ENST00000454542 KRT84Q9NSB2 600 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 DDX28Q9NUL7 540 aaKnown RBP12.14□□□□□ -0.47
HDAC4-205ENST00000454542 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
HDAC4-205ENST00000454542 ACANP16112 2415 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 CR1P17927 2039 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 TVP23AA6NH52 213 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 FAM183AA6NL82 134 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ZAR1LA6NP61 321 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 H7C1Q1 480 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 PRODHO43272 600 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 MITFO75030 526 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 GLCEO94923 617 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ABHD16AO95870 558 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 F12P00748 615 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 NGFP01138 241 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 LCKP06239 509 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 CSF3P09919 207 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 SLC2A5P22732 501 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 TUBG1P23258 451 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 FMO3P31513 532 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 OTX1P32242 354 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ENTPD1P49961 510 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 DSCR9P59020 149 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 PPP1CBP62140 327 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 TNK1Q13470 666 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 MAD2L1BPQ15013 274 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 SLX4IPQ5VYV7 408 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ABHD4Q8TB40 342 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 SYNPRQ8TBG9 265 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 SLC7A6Q92536 515 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 CIB1Q99828 191 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 ATF6BQ99941 703 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 PKP2Q99959 881 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 GABARAPL3Q9BY60 117 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 OR2J1Q9GZK6 312 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 RAB1BQ9H0U4 201 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 POFUT1Q9H488 388 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 MED20Q9H944 212 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 WDR76Q9H967 626 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 DYNLRB1Q9NP97 96 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 TUBG2Q9NRH3 451 aa12.13□□□□□ -0.47
HDAC4-205ENST00000454542 EIF3KQ9UBQ5 218 aaKnown RBP12.13□□□□□ -0.47
HDAC4-205ENST00000454542 IGHV4-30-2A0A087WSY4 118 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 SSX4O60224 188 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 LY6HO94772 140 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 HLA-DQA2P01906 255 aa12.12□□□□□ -0.47
HDAC4-205ENST00000454542 ADRA2AP08913 450 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms