RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 ZNF620Q6ZNG0 422 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 IL17RELQ6ZVW7 336 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 USP51Q70EK9 711 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 HIST2H3AQ71DI3 136 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 ELMOD3Q96FG2 381 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 COG8Q96MW5 612 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 ERMAPQ96PL5 475 aaPredicted RBP10.24□□□□□ -0.77
USP40-210ENST00000454354 DIRC2Q96SL1 478 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 MUC13Q9H3R2 512 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 DECR2Q9NUI1 292 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 PLEK2Q9NYT0 353 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 ASH2LQ9UBL3 628 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 TMCC3Q9ULS5 477 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 LYVE1Q9Y5Y7 322 aa10.24□□□□□ -0.77
USP40-210ENST00000454354 TCRBV5S2A0A599 114 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 B2RBV5 119 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 FAM157AC9JC47 383 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 DCTN6O00399 190 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 WNT9BO14905 357 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 IDH3BO43837 385 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 FAM107AO95990 144 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 HIST1H1CP16403 213 aaKnown RBP10.23□□□□□ -0.77
USP40-210ENST00000454354 GSTM3P21266 225 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 KITLGP21583 273 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 PCMT1P22061 227 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 PSG7Q13046 419 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 TSTQ16762 297 aaKnown RBP10.23□□□□□ -0.77
USP40-210ENST00000454354 CCDC92Q53HC0 331 aaPredicted RBP10.23□□□□□ -0.77
USP40-210ENST00000454354 LCN8Q6JVE9 175 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 LEG1Q6P5S2 330 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 ZBTB46Q86UZ6 589 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 JAZF1Q86VZ6 243 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 LINC00471Q8N535 108 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 OR1F12Q8NHA8 337 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 GNPDA2Q8TDQ7 276 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 TSSK2Q96PF2 358 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 DCLRE1CQ96SD1 692 aaKnown RBP10.23□□□□□ -0.77
USP40-210ENST00000454354 TRIM15Q9C019 465 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 POFUT1Q9H488 388 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 RERGLQ9H628 205 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 TMEFF2Q9UIK5 374 aaPredicted RBP10.23□□□□□ -0.77
USP40-210ENST00000454354 ZDHHC8Q9ULC8 765 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 B9D1Q9UPM9 204 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 LHFPL6Q9Y693 200 aa10.23□□□□□ -0.77
USP40-210ENST00000454354 ARHGAP32A7KAX9 2087 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 DOCK11Q5JSL3 2073 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 CLDN25C9JDP6 229 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 PHF1O43189 567 aaPredicted RBP10.22□□□□□ -0.77
USP40-210ENST00000454354 TPD52L2O43399 206 aaKnown RBP10.22□□□□□ -0.77
USP40-210ENST00000454354 SPRY3O43610 288 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 CDC14BO60729 498 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 RENP00797 406 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 MSMBP08118 114 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 RGS6P49758 472 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 COX10Q12887 443 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 CDK5R2Q13319 367 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 HFEQ30201 348 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 OTPQ5XKR4 325 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 ZNF770Q6IQ21 691 aaPredicted RBP10.22□□□□□ -0.77
USP40-210ENST00000454354 RPL13AP3Q6NVV1 102 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 CYP2R1Q6VVX0 501 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 GLCCI1Q86VQ1 547 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 OR6V1Q8N148 313 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 GJC3Q8NFK1 279 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 SLC26A10Q8NG04 563 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 OR4C15Q8NGM1 316 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 OR4K13Q8NH42 304 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 TMEM158Q8WZ71 300 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 SLC7A6Q92536 515 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 POP5Q969H6 163 aaKnown RBP10.22□□□□□ -0.77
USP40-210ENST00000454354 NSL1Q96IY1 281 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 SAMD8Q96LT4 415 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 NMNAT3Q96T66 252 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 COQ7Q99807 217 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 BTBD10Q9BSF8 475 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 IFT27Q9BW83 186 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 EGLN1Q9GZT9 426 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 HDHD2Q9H0R4 259 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 NARFLQ9H6Q4 476 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 MAGIXQ9H6Y5 334 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 ZNF665Q9H7R5 613 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 TREM2Q9NZC2 230 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 PURGQ9UJV8 347 aaKnown RBP10.22□□□□□ -0.77
USP40-210ENST00000454354 CDH10Q9Y6N8 788 aa10.22□□□□□ -0.77
USP40-210ENST00000454354 OR6C68A6NDL8 312 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 RNF212BA8MTL3 300 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 TNFRSF11BO00300 401 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 RER1O15258 196 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 TIMM8AO60220 97 aaPredicted RBP10.21□□□□□ -0.77
USP40-210ENST00000454354 DEAF1O75398 565 aaPredicted RBP10.21□□□□□ -0.77
USP40-210ENST00000454354 UBOX5O94941 541 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 GPANK1O95872 356 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 T-ENOLP0DO92 83 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 CALB2P22676 271 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 TRIM25Q14258 630 aaKnown RBP10.21□□□□□ -0.77
USP40-210ENST00000454354 MEP1BQ16820 701 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 KRTAP27-1Q3LI81 207 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 AVPI1Q5T686 147 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 Q6ZR03 302 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 DHFR2Q86XF0 187 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms