RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 OTULINQ96BN8 352 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 FBXO17Q96EF6 278 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 Q96MT0 163 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF75AQ96N20 296 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TSSK2Q96PF2 358 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 INTS14Q96SY0 518 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 MYCBPQ99417 103 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 COQ7Q99807 217 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 SLC29A1Q99808 456 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TOR3AQ9H497 397 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 CDH20Q9HBT6 801 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 EMC7Q9NPA0 242 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 HINT3Q9NQE9 182 aaKnown RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 TUBG2Q9NRH3 451 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 HAO2Q9NYQ3 351 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 ASH2LQ9UBL3 628 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 WARS2Q9UGM6 360 aaKnown RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 CYB5R1Q9UHQ9 305 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 RRP15Q9Y3B9 282 aaKnown RBP7.56□□□□□ -1.2
COL28A1-205ENST00000453441 COMMD3-BMI1R4GMX3 469 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 HSPE1-MOB4S4R3N1 261 aa7.56□□□□□ -1.2
COL28A1-205ENST00000453441 LOC100130705A0A1B0GUX0 176 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF503-AS2A6NEH8 195 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 OR6C6A6NF89 314 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 FAM183AA6NL82 134 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 PRKYO43930 277 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 DOK2O60496 412 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 APOC1P02654 83 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 TFP02787 698 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 SLC2A5P22732 501 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 STOMP27105 288 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 EPHA2P29317 976 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 PYCR1P32322 319 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 HSPA13P48723 471 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 RGS6P49758 472 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 GDI2P50395 445 aaKnown RBP7.55□□□□□ -1.2
COL28A1-205ENST00000453441 NUDT6P53370 316 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 RPS7P62081 194 aaKnown RBP7.55□□□□□ -1.2
COL28A1-205ENST00000453441 TUBA1BP68363 451 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 TUBA4AP68366 448 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 PSG4Q00888 419 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 PIGFQ07326 219 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 RAB39AQ14964 217 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 KLHL12Q53G59 568 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 ELFN2Q5R3F8 820 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 XP32Q5T750 250 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 AADACL4Q5VUY2 407 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 SLC22A25Q6T423 547 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 TUBA1AQ71U36 451 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 MEPCEQ7L2J0 689 aaKnown RBP7.55□□□□□ -1.2
COL28A1-205ENST00000453441 CDC20BQ86Y33 519 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 DHRSXQ8N5I4 330 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF611Q8N823 705 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 FAM81AQ8TBF8 368 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 FBXW5Q969U6 566 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 COG8Q96MW5 612 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 MBOAT4Q96T53 435 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 BCL2L14Q9BZR8 327 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 OR51V1Q9H2C8 321 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF442Q9H7R0 627 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 FAM118AQ9NWS6 357 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 PLEK2Q9NYT0 353 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 EIF3KQ9UBQ5 218 aaKnown RBP7.55□□□□□ -1.2
COL28A1-205ENST00000453441 POU2F3Q9UKI9 436 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 LHFPL6Q9Y693 200 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 TMEM14AQ9Y6G1 99 aa7.55□□□□□ -1.2
COL28A1-205ENST00000453441 SPG11Q96JI7 2443 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 IGHV2OR16-5A0A0B4J2B6 119 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 SHISA9B4DS77 424 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 H3BSA7 217 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF593O00488 134 aaPredicted RBP7.54□□□□□ -1.2
COL28A1-205ENST00000453441 HS3ST1O14792 307 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 PHYHO14832 338 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ATP6V1G2O95670 118 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 GYPBP06028 91 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 SPARCP09486 303 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF35P13682 527 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 HTR1FP30939 366 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 GLRXP35754 106 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 POLR2IP36954 125 aaKnown RBP7.54□□□□□ -1.2
COL28A1-205ENST00000453441 RAD52P43351 418 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 SLC15A1P46059 708 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 HTR5AP47898 357 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 CDH11P55287 796 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 APOFQ13790 326 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 LRRC36Q1X8D7 754 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ZIK1Q3SY52 487 aaPredicted RBP7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF672Q499Z4 452 aaPredicted RBP7.54□□□□□ -1.2
COL28A1-205ENST00000453441 SLC18B1Q6NT16 456 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 UGT2A3Q6UWM9 527 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 SLC16A9Q7RTY1 509 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ERI1Q8IV48 349 aaKnown RBP7.54□□□□□ -1.2
COL28A1-205ENST00000453441 ZNF584Q8IVC4 421 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 TIGD4Q8IY51 512 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 GALNT4Q8N4A0 578 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 OR1F12Q8NHA8 337 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 FGFBP3Q8TAT2 258 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 NINJ1Q92982 152 aa7.54□□□□□ -1.2
COL28A1-205ENST00000453441 SPTSSAQ969W0 71 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms