RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 PDLIM4P50479 330 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 BLVRAP53004 296 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 MEP1BQ16820 701 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 MSMPQ1L6U9 139 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 ZNF718Q3SXZ3 478 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 OTPQ5XKR4 325 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 ZNF525Q8N782 197 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 IPCEF1Q8WWN9 437 aaPredicted RBP13.32□□□□□ -0.28
VPS8-213ENST00000453056 FAM168AQ92567 244 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 DUS3LQ96G46 650 aaKnown RBP13.32□□□□□ -0.28
VPS8-213ENST00000453056 C4orf45Q96LM5 186 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 COG8Q96MW5 612 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 COQ7Q99807 217 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 RBM4Q9BWF3 364 aaKnown RBP13.32□□□□□ -0.28
VPS8-213ENST00000453056 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 PAPOLBQ9NRJ5 636 aaKnown RBP13.32□□□□□ -0.28
VPS8-213ENST00000453056 LHFPL6Q9Y693 200 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 SONP18583 2426 aaKnown RBP13.32□□□□□ -0.28
VPS8-213ENST00000453056 CR1P17927 2039 aa13.32□□□□□ -0.28
VPS8-213ENST00000453056 SMAD7O15105 426 aaKnown RBP13.31□□□□□ -0.28
VPS8-213ENST00000453056 RER1O15258 196 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ZNF23P17027 643 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 PRKACGP22612 351 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 FMO3P31513 532 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ALDH3B1P43353 468 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 PPP1CBP62140 327 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ECH1Q13011 328 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ELFN2Q5R3F8 820 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ZDHHC13Q8IUH4 622 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ZNF101Q8IZC7 436 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 PARP8Q8N3A8 854 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 OR6K6Q8NGW6 343 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 PLEKHA8Q96JA3 519 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 RAB3IPQ96QF0 476 aaPredicted RBP13.31□□□□□ -0.28
VPS8-213ENST00000453056 DCLRE1CQ96SD1 692 aaKnown RBP13.31□□□□□ -0.28
VPS8-213ENST00000453056 DDOQ99489 341 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 PITX2Q99697 317 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 TBCCD1Q9NVR7 557 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 TAAR3PQ9P1P4 343 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 ENOPH1Q9UHY7 261 aa13.31□□□□□ -0.28
VPS8-213ENST00000453056 NSD1Q96L73 2696 aaPredicted RBP13.31□□□□□ -0.28
VPS8-213ENST00000453056 IGLV3-9A0A075B6K5 115 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 G3V2T6 193 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 J3QW42 95 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 TFP02787 698 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 SLC25A16P16260 332 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 SPI1P17947 270 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 TUBG1P23258 451 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 RGS6P49758 472 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 ERVS71-1P61550 626 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 GINS1Q14691 196 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
VPS8-213ENST00000453056 CARTPTQ16568 116 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
VPS8-213ENST00000453056 SPATA46Q5T0L3 261 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 SLC18B1Q6NT16 456 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 ZFP1Q6P2D0 407 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 FAHD1Q6P587 224 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 TMEM154Q6P9G4 183 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 CORO6Q6QEF8 472 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 LRP11Q86VZ4 500 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 OR51L1Q8NGJ5 315 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 SLC25A40Q8TBP6 338 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 OTULINQ96BN8 352 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 PIMREGQ9BSJ6 248 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 REG4Q9BYZ8 158 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 PRRG3Q9BZD7 231 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 NMNAT2Q9BZQ4 307 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 TPK1Q9H3S4 243 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 TUBG2Q9NRH3 451 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 MYEF2Q9P2K5 600 aaKnown RBP13.3□□□□□ -0.28
VPS8-213ENST00000453056 CYB5R1Q9UHQ9 305 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 GRIP1Q9Y3R0 1128 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
VPS8-213ENST00000453056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS8-213ENST00000453056 IGHV4-30-2A0A087WSY4 118 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 PLSCR5A0PG75 271 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 RNF223E7ERA6 249 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 NDUFS8O00217 210 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 LY6HO94772 140 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 GYPBP06028 91 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 GGT2P36268 569 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 ACTR3P61158 418 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 ZMAT1Q5H9K5 638 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 ZNF362Q5T0B9 420 aaPredicted RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 HIST2H3PS2Q5TEC6 136 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 MBNL2Q5VZF2 373 aaKnown RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 HIST2H3AQ71DI3 136 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 CIARTQ8N365 385 aaPredicted RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 CENPNQ96H22 339 aaPredicted RBP13.29□□□□□ -0.28
VPS8-213ENST00000453056 OR2J1Q9GZK6 312 aa13.29□□□□□ -0.28
VPS8-213ENST00000453056 GABARAPL1Q9H0R8 117 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms