RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DHFRP00374 187 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 RAB40ALP0C0E4 278 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 ADH6P28332 368 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 RFC3P40938 356 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 RAB11BQ15907 218 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 TMEM255AQ5JRV8 349 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 LRRC18Q8N456 261 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 OR10S1Q8NGN2 331 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 RNF133Q8WVZ7 376 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 RAB40AQ8WXH6 277 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 NKD1Q969G9 470 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 ATG5Q9H1Y0 275 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 PLSCR3Q9NRY6 295 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 PAQR5Q9NXK6 330 aaPredicted RBP10.47□□□□□ -0.73
VTA1-203ENST00000452973 FLVCR2Q9UPI3 526 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 LHFPL6Q9Y693 200 aa10.47□□□□□ -0.73
VTA1-203ENST00000452973 TRAV18A0A075B6X5 111 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 NPIPB13A6NJU9 1138 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 C9orf172C9J069 976 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 NPIPB4C9JG80 1138 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 NPIPA2E9PIF3 369 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 NPIPA3F8WFD2 350 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 RFPL3SP0C7P2 107 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 HLA-DMAP28067 261 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 DCTDP32321 178 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 STARP49675 285 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 BAIAP2L2Q6UXY1 529 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 NHLRC1Q6VVB1 395 aa10.46□□□□□ -0.73
VTA1-203ENST00000452973 ZMAT3Q9HA38 289 aaKnown RBP10.46□□□□□ -0.73
VTA1-203ENST00000452973 PRRC2CQ9Y520 2896 aaKnown RBP10.46□□□□□ -0.74
VTA1-203ENST00000452973 GABARAPH6UMI1 98 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 CDX4O14627 284 aaPredicted RBP10.46□□□□□ -0.74
VTA1-203ENST00000452973 CD59P13987 128 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.74
VTA1-203ENST00000452973 GUCA2AQ02747 115 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 KLF9Q13886 244 aaPredicted RBP10.46□□□□□ -0.74
VTA1-203ENST00000452973 ACER2Q5QJU3 275 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 NAXDQ8IW45 347 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 BEST3Q8N1M1 668 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 OR6X1Q8NH79 312 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 THOC3Q96J01 351 aaKnown RBP10.46□□□□□ -0.74
VTA1-203ENST00000452973 TAAR9Q96RI9 348 aa10.46□□□□□ -0.74
VTA1-203ENST00000452973 RBM24Q9BX46 236 aaKnown RBP10.46□□□□□ -0.74
VTA1-203ENST00000452973 A0A0J9YW62 118 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 SRSF10O75494 262 aaKnown RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 CBR3O75828 277 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 ACSM4P0C7M7 580 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 AVPR2P30518 371 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 GUCA1AP43080 201 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 SPINK14Q6IE38 97 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 DBX2Q6ZNG2 339 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 OR51E1Q8TCB6 317 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 AKAP1Q92667 903 aaKnown RBP eCLIP10.45□□□□□ -0.74
VTA1-203ENST00000452973 PBOV1Q9GZY1 135 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 OR10A4Q9H209 315 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 STMN3Q9NZ72 180 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 DOCK10Q96BY6 2186 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 A0A1W2PNU3 283 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 SYT7O43581 403 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 HRGP04196 525 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 HTR2CP28335 458 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 DLSTP36957 453 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 GABREP78334 506 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 PCK2Q16822 640 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 GLT8D1Q68CQ7 371 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 ZNF704Q6ZNC4 412 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 NCCRP1Q6ZVX7 275 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 ZNF627Q7L945 461 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 SPACA5Q96QH8 159 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 SOX7Q9BT81 388 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 MED28Q9H204 178 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 HRASLSQ9HDD0 168 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 ZNF222Q9UK12 451 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 ETV7Q9Y603 341 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 GSTZ1O43708 216 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 TLX3O43711 291 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 CTAG2O75638 210 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 TTRP02766 147 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 ANOS1P23352 680 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 SSPNQ14714 243 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 WIPI1Q5MNZ9 446 aaPredicted RBP10.45□□□□□ -0.74
VTA1-203ENST00000452973 PHYHD1Q5SRE7 291 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 BIVMQ86UB2 503 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 RNF170Q96K19 258 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 CMTM3Q96MX0 182 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 MRI1Q9BV20 369 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 FAM206AQ9NX38 181 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 ING3Q9NXR8 418 aa10.45□□□□□ -0.74
VTA1-203ENST00000452973 PCNX2A6NKB5 2137 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 A0A087WZY1 265 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 SLC17A2O00624 439 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 H2AFB2P0C5Z0 115 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 ICAM2P13598 275 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 CSNK1A1P48729 337 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 SELENOPP49908 381 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 FCN2Q15485 313 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 TMEM164Q5U3C3 297 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 TMEM244Q5VVB8 128 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 HACD4Q5VWC8 232 aa10.44□□□□□ -0.74
VTA1-203ENST00000452973 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms