RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 CORO6Q6QEF8 472 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 SLC16A9Q7RTY1 509 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 BCDIN3DQ7Z5W3 292 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 CDC20BQ86Y33 519 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 NUP37Q8NFH4 326 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 POM121L2Q96KW2 1035 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 Q96MT0 163 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 MNTQ99583 582 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 ATF6BQ99941 703 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 YIPF3Q9GZM5 350 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 DDX28Q9NUL7 540 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 POU2F3Q9UKI9 436 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 SPEF1Q9Y4P9 236 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 HSPE1-MOB4S4R3N1 261 aa12.63□□□□□ -0.39
TRAPPC12-211ENST00000452495 A0A1W2PPR1 153 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 ZNF878C9JN71 531 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 HS3ST1O14792 307 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 SELENOFO60613 162 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 ICMTO60725 284 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 PSKH1P11801 424 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 PRF1P14222 555 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 PCSK6P29122 969 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 VHLP40337 213 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 NAA10P41227 235 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 RPS27P42677 84 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 IL5RAQ01344 420 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 EIF2B1Q14232 305 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 MAD2L1BPQ15013 274 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 DPY19L4Q7Z388 723 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 C8orf59Q8N0T1 100 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 OR1F12Q8NHA8 337 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 RHOXF1Q8NHV9 184 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 OTOSQ8NHW6 89 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 MAP6Q96JE9 813 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 DCLRE1CQ96SD1 692 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 RASSF4Q9H2L5 321 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 PNRC2Q9NPJ4 139 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 CLN6Q9NWW5 311 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
TRAPPC12-211ENST00000452495 FBN2P35556 2912 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 LOC100509620A0A075B734 347 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 C5orf49A4QMS7 147 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 J3QW42 95 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 PHYHO14832 338 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ENTPD6O75354 484 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 PLAUP00749 431 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 LYNP07948 512 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 NUDT6P53370 316 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 RPS23P62266 143 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ARL9Q6T311 187 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 B3GLCTQ6Y288 498 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 USP51Q70EK9 711 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 C1orf174Q8IYL3 243 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 AKAP1Q92667 903 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 TFAP2CQ92754 450 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 UBE2FQ969M7 185 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 SLAMF6Q96DU3 332 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ABHD6Q9BV23 337 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ZNF442Q9H7R0 627 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 PLEKHF2Q9H8W4 249 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ADGRL4Q9HBW9 690 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ATP23Q9Y6H3 246 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 CACNA1DQ01668 2161 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 RTTNQ86VV8 2226 aa12.61□□□□□ -0.39
TRAPPC12-211ENST00000452495 ROS1P08922 2347 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 CLIC3O95833 236 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 MRPL3P09001 348 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 SBK2P0C263 348 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 NR4A1P22736 598 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 MTNR1AP48039 350 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 RGS6P49758 472 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 GRB2P62993 217 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 NKX6-1P78426 367 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 SNTB2Q13425 540 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 KRTAP27-1Q3LI81 207 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 SLC35F2Q8IXU6 374 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 ZNF611Q8N823 705 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 OR51G2Q8NGK0 314 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 OR10S1Q8NGN2 331 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 LILRB1Q8NHL6 650 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 RNF133Q8WVZ7 376 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 APH1BQ8WW43 257 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 COPS4Q9BT78 406 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 BCL2L14Q9BZR8 327 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 FAIMQ9NVQ4 179 aa12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 EIF3KQ9UBQ5 218 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-211ENST00000452495 LAMP5Q9UJQ1 280 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms