RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	IGHV1-46	P01743	117 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	GAA	P10253	952 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	SDHA	P31040	664 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	OMP	P47874	163 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	LIMS1	P48059	325 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	ARHGDIA	P52565	204 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	FXYD6P3	P58550	94 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	DGCR6	Q14129	220 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	MEP1B	Q16820	701 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	KRTAP24-1	Q3LI83	254 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	GPR139	Q6DWJ6	353 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	UNQ6126/PRO20091	Q6UXV3	157 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	GLCCI1	Q86VQ1	547 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	DEFB107A	Q8IZN7	70 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	PGAM4	Q8N0Y7	254 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	TMEM158	Q8WZ71	300 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	CCL17	Q92583	94 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	MCUR1	Q96AQ8	359 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	PYURF	Q96I23	114 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	C7orf34	Q96L11	122 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	NSMCE2	Q96MF7	247 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	TSSK2	Q96PF2	358 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	ERMAP	Q96PL5	475 aa	Predicted RBP	7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	LRRC37B	Q96QE4	947 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	CDRT15	Q96T59	188 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	GPA33	Q99795	319 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	NUAK2	Q9H093	628 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	FN3K	Q9H479	309 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	ELOVL3	Q9HB03	270 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	PLEK2	Q9NYT0	353 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	ASH2L	Q9UBL3	628 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	TAGLN3	Q9UI15	199 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	MAGEL2	Q9UJ55	1249 aa		7.38	□□□□□ -1.23
RFX3-209	ENST00000451859	NDRG4	Q9ULP0	352 aa	Known RBP	7.38	□□□□□ -1.23
RFX3-209	ENST00000451859		B4DSR2	109 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	PTP4A3	O75365	173 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	RGS9	O75916	674 aa	Predicted RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	FABP3	P05413	133 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	MSMB	P08118	114 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	DBH	P09172	617 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	HSD17B1	P14061	328 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	ITGA2	P17301	1181 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	GSTM3	P21266	225 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	RRM2	P31350	389 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	CDKN2A	P42771	156 aa	Known RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	MMP15	P51511	669 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	RPS6KA3	P51812	740 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	DVL1P1	P54792	670 aa	Predicted RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	TMEM33	P57088	247 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	TEK	Q02763	1124 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	AQP6	Q13520	282 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	MOG	Q16653	247 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	HFE	Q30201	348 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	SPRN	Q5BIV9	151 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	SAMD4B	Q5PRF9	694 aa	Known RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	MBNL2	Q5VZF2	373 aa	Known RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	LEG1	Q6P5S2	330 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	SHQ1	Q6PI26	577 aa	Known RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	SMARCD3	Q6STE5	483 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	ARL9	Q6T311	187 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	C16orf89	Q6UX73	402 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	CYP2R1	Q6VVX0	501 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	JAZF1	Q86VZ6	243 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	GLB1L2	Q8IW92	636 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	OR5AS1	Q8N127	324 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	OR51F2	Q8NH61	342 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	SPATA3	Q8NHX4	192 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	TMEM186	Q96B77	213 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	TIMD4	Q96H15	378 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	IFT27	Q9BW83	186 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	KRTAP4-7	Q9BYR0	210 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	EGLN1	Q9GZT9	426 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	OR52D1	Q9H346	318 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	METTL17	Q9H7H0	456 aa	Predicted RBP	7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	NRIP3	Q9NQ35	241 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	HIF1AN	Q9NWT6	349 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	UBAP1	Q9NZ09	502 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	PTTG3P	Q9NZH4	202 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	TMCC3	Q9ULS5	477 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	ARL2BP	Q9Y2Y0	163 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	WIPI2	Q9Y4P8	454 aa		7.37	□□□□□ -1.23
RFX3-209	ENST00000451859	DCTN6	O00399	190 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	RER1	O15258	196 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	DCTN3	O75935	186 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	REN	P00797	406 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	TF	P02787	698 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SEMG1	P04279	462 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ATP6V1B2	P21281	511 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	NOS3	P29474	1203 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SLC6A6	P31641	620 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	CRYBB2	P43320	205 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	ERF	P50548	548 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	SMIM11A	P58511	58 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	LMO4	P61968	165 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	MRPS11	P82912	194 aa	Known RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	TNFAIP6	P98066	277 aa	Predicted RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	PSG7	Q13046	419 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	HLX	Q14774	488 aa	Predicted RBP	7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	MTX3	Q5HYI7	312 aa		7.36	□□□□□ -1.23
RFX3-209	ENST00000451859	CLEC12A	Q5QGZ9	265 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms