RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 AQP6Q13520 282 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 KRT72Q14CN4 511 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 GLB1L2Q8IW92 636 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 RNF148Q8N7C7 305 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 OR2Z1Q8NG97 314 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 OR52J3Q8NH60 311 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 ST7LQ8TDW4 575 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 SLC7A6Q92536 515 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 C7orf34Q96L11 122 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 TMPRSS13Q9BYE2 586 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 POFUT1Q9H488 388 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 KRCC1Q9NPI7 259 aaPredicted RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 DCAF13Q9NV06 445 aaKnown RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 ADA2Q9NZK5 511 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 VSX1Q9NZR4 365 aaPredicted RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 PURGQ9UJV8 347 aaKnown RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 SAMD4AQ9UPU9 718 aaKnown RBP11.6□□□□□ -0.55
TOM1-211ENST00000449508 NPTNQ9Y639 398 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 ANK2Q01484 3957 aa11.6□□□□□ -0.55
TOM1-211ENST00000449508 TRBV4-1A0A0J9YWV2 114 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 UNC119BA6NIH7 251 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 J3QLI3 93 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 SBK2P0C263 348 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 ADRA2CP18825 462 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 TNFRSF1AP19438 455 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 KITLGP21583 273 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 EPHA1P21709 976 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 CDKN2AP42771 156 aaKnown RBP11.59□□□□□ -0.55
TOM1-211ENST00000449508 LIMS1P48059 325 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 RPS6KA3P51812 740 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 LCN2P80188 198 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 SEC23BQ15437 767 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 C12orf54Q6X4T0 127 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 DPY19L2P2Q6ZN68 376 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 PTCHD4Q6ZW05 846 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 OR1F12Q8NHA8 337 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 ZFAND2BQ8WV99 257 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 HAVCR1Q96D42 359 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 SAMD8Q96LT4 415 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 COG8Q96MW5 612 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 GPX7Q96SL4 187 aaPredicted RBP11.59□□□□□ -0.55
TOM1-211ENST00000449508 NUAK2Q9H093 628 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 MYLK2Q9H1R3 596 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 C7orf69Q9H7B7 122 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 SPAG4Q9NPE6 437 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 TMEM106BQ9NUM4 274 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
TOM1-211ENST00000449508 RER1O15258 196 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 SURF4O15260 269 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 GATA3P23771 443 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 RBMXP38159 391 aaKnown RBP11.58□□□□□ -0.56
TOM1-211ENST00000449508 FXYD6P3P58550 94 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 HNRNPA0Q13151 305 aaKnown RBP11.58□□□□□ -0.56
TOM1-211ENST00000449508 CCDC92Q53HC0 331 aaPredicted RBP11.58□□□□□ -0.56
TOM1-211ENST00000449508 SMARCD3Q6STE5 483 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 Q6ZR03 302 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 C1QL2Q7Z5L3 287 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.58□□□□□ -0.56
TOM1-211ENST00000449508 ADCK1Q86TW2 530 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 FAM86B1Q8N7N1 296 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 SEMA6DQ8NFY4 1073 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 OR5L1Q8NGL2 311 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 NANPQ8TBE9 248 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 ERMAPQ96PL5 475 aaPredicted RBP11.58□□□□□ -0.56
TOM1-211ENST00000449508 FAM107BQ9H098 131 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 SRA1Q9HD15 236 aaKnown RBP11.58□□□□□ -0.56
TOM1-211ENST00000449508 IL19Q9UHD0 177 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 POLR1DQ9Y2S0 133 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 V9GYQ6 96 aa11.58□□□□□ -0.56
TOM1-211ENST00000449508 OR6C6A6NF89 314 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 PPP1R3DO95685 299 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 GPANK1O95872 356 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 TXNDC12O95881 172 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 DBHP09172 617 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 RAC2P15153 192 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 CRABP1P29762 137 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 PRDX6P30041 224 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 SMIM11AP58511 58 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 KCNMB1Q16558 191 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 DNM1P34Q6PK57 102 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 USP43Q70EL4 1123 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 OR5AS1Q8N127 324 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 KLHL36Q8N4N3 616 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 ATG16L2Q8NAA4 619 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 GJC3Q8NFK1 279 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 ITLN1Q8WWA0 313 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 PYURFQ96I23 114 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 TSSK2Q96PF2 358 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 GPA33Q99795 319 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 GORASP2Q9H8Y8 452 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 PTTG3PQ9NZH4 202 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 PPP1R3CQ9UQK1 317 aa11.57□□□□□ -0.56
TOM1-211ENST00000449508 TRIM77I1YAP6 450 aa11.56□□□□□ -0.56
TOM1-211ENST00000449508 DCTN6O00399 190 aa11.56□□□□□ -0.56
TOM1-211ENST00000449508 FOXH1O75593 365 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms