RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SLC18B1Q6NT16 456 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 CORO6Q6QEF8 472 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 MYPOPQ86VE0 399 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 LILRB1Q8NHL6 650 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 ZMYND19Q96E35 227 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 POM121L2Q96KW2 1035 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 SLC29A1Q99808 456 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 ATF6BQ99941 703 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 CBLN4Q9NTU7 201 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 BEX4Q9NWD9 120 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 MRPL22Q9NWU5 206 aaKnown RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 GRIP1Q9Y3R0 1128 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 LHFPL6Q9Y693 200 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 TMEM14AQ9Y6G1 99 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 APOC1P02654 83 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 OR4A8P0C604 315 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 FAM157BP0CG42 384 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 TUBG1P23258 451 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 PEX2P28328 305 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 GCH1P30793 250 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 GLRXP35754 106 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 TPTEP56180 551 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 POU4F2Q12837 409 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 EIF2B1Q14232 305 aaKnown RBP12.19□□□□□ -0.46
SSBP3-208ENST00000444533 MEDAGQ5VYS4 303 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 TTC23Q5W5X9 447 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 LPCAT4Q643R3 524 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 MEPCEQ7L2J0 689 aaKnown RBP12.19□□□□□ -0.46
SSBP3-208ENST00000444533 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-208ENST00000444533 OR5L1Q8NGL2 311 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 NRGNQ92686 78 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 C4orf45Q96LM5 186 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 Q96MT0 163 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 TEAD3Q99594 435 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 COPS4Q9BT78 406 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 OR51B6Q9H340 312 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 PLK3Q9H4B4 646 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 WDR76Q9H967 626 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 TUBG2Q9NRH3 451 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 CENPMQ9NSP4 180 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 LAMP5Q9UJQ1 280 aa12.19□□□□□ -0.46
SSBP3-208ENST00000444533 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 B9A039 149 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF878C9JN71 531 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 J3QW42 95 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 CASQ2O14958 399 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 SYNGR3O43761 229 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 RRP9O43818 475 aaKnown RBP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 ATE1O95260 518 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 MT-ND5P03915 603 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 HSD11B1P28845 292 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 THBS4P35443 961 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 SLC6A9P48067 706 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 GRB2P62993 217 aaKnown RBP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 HGFACQ04756 655 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF718Q3SXZ3 478 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 CCDC92Q53HC0 331 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 LINC01590Q5TEZ4 76 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 B3GLCTQ6Y288 498 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 SLC16A9Q7RTY1 509 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 DHRSXQ8N5I4 330 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 SETD9Q8NE22 299 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 BBS1Q8NFJ9 593 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 OR1J1Q8NGS3 322 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 ABHD4Q8TB40 342 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 THEM6Q8WUY1 208 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 CYGBQ8WWM9 190 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 CNN2Q99439 309 aaKnown RBP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 LIME1Q9H400 295 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 SP140LQ9H930 580 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 FAM118AQ9NWS6 357 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 CLN6Q9NWW5 311 aa12.18□□□□□ -0.46
SSBP3-208ENST00000444533 WARS2Q9UGM6 360 aaKnown RBP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSBP3-208ENST00000444533 LOC100509620A0A075B734 347 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 A0A1W2PPW3 197 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 F5H5K5 113 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 M0R129 80 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 PHYHO14832 338 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 LYNP07948 512 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 CD53P19397 219 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 SLC2A5P22732 501 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 NAA10P41227 235 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-208ENST00000444533 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 NKX6-1P78426 367 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-208ENST00000444533 DBPQ10586 325 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-208ENST00000444533 TMED1Q13445 227 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 ADIPOQQ15848 244 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 DEFB113Q30KQ7 82 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 OGFRL1Q5TC84 451 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms