RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 JCHAINP01591 159 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 IDSP22304 550 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPL4P36578 427 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 P2RY1P47900 373 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 EIF2B2P49770 351 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CCR6P51684 374 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPS6P62753 249 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 OGDHQ02218 1023 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SEMG2Q02383 582 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 KRR1Q13601 381 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RAB31Q13636 194 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 VGLL4Q14135 290 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 KCNJ8Q15842 424 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CCDC6Q16204 474 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SOHLH1Q5JUK2 328 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM199XQ6PEV8 388 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM144Q7Z5S9 345 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 MOB3BQ86TA1 216 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 MFSD6LQ8IWD5 586 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RFLNBQ8N5W9 214 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR7G2Q8NG99 324 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR4K2Q8NGD2 314 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 PHF10Q8WUB8 498 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TFGQ92734 400 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 BADQ92934 168 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 C11orf52Q96A22 123 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 PTH2Q96A98 100 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CELF6Q96J87 481 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 IL4I1Q96RQ9 567 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 DDA1Q9BW61 102 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 UCK2Q9BZX2 261 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 NXF5Q9H1B4 397 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 LIME1Q9H400 295 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF334Q9HCZ1 680 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 IL36GQ9NZH8 169 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TIMM10BQ9Y5J6 103 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 BLMP54132 1417 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TNS2Q63HR2 1409 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 ANKRD30BQ9BXX2 1392 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 IGLON5A6NGN9 336 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 C9J4A7 227 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 H0Y980 276 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TFECO14948 347 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 MAGEB4O15481 346 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 KLRC4O43908 158 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 FCN3O75636 299 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 POP7O75817 140 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR7A10O76100 309 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 UTS2O95399 124 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RBP1P09455 135 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 HOXB7P09629 217 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 GZMHP20718 246 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CALML3P27482 149 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CCR7P32248 378 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RBM34P42696 430 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 XKP51811 444 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CLDN18P56856 261 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 NUTF2P61970 127 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM3AP98173 230 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TPBGQ13641 420 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 APOFQ13790 326 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CRMP1Q14194 572 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 ATP6AP1Q15904 470 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC36A2Q495M3 483 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 VPS26BQ4G0F5 336 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CYBRD1Q53TN4 286 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TRIQKQ629K1 86 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF324BQ6AW86 544 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 ULK3Q6PHR2 472 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC16A14Q7RTX9 510 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM25Q86YD3 366 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SUMF1Q8NBK3 374 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 PXT1Q8NFP0 134 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR9A4Q8NGU2 314 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR4Q3Q8NH05 313 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 PIGXQ8TBF5 258 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TBCKQ8TEA7 893 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 C16orf78Q8WTQ4 265 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SDR42E1Q8WUS8 393 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 APH1BQ8WW43 257 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TCEAL3Q969E4 200 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SDSLQ96GA7 329 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 QKIQ96PU8 341 aaKnown RBP eCLIP3.39□□□□□ -1.877e-32■■■■■ 79
CDC42BPA-207ENST00000441725 SLC35A5Q9BS91 424 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 CLEC7AQ9BXN2 247 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SIAEQ9HAT2 523 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 RHOFQ9HBH0 211 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SPHK2Q9NRA0 654 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 LYARQ9NX58 379 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 BABAM2Q9NXR7 383 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SIGLEC8Q9NYZ4 499 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM9Q9P0T7 183 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SEC14L4Q9UDX3 406 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF221Q9UK13 617 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 MOKQ9UQ07 419 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 SHPRHQ149N8 1683 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 KIAA0232Q92628 1395 aa3.39□□□□□ -1.87
CDC42BPA-207ENST00000441725 FGD6Q6ZV73 1430 aa3.38□□□□□ -1.87
CDC42BPA-207ENST00000441725 IQCMA0A1B0GVH7 501 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms