RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ADRA2CP18825 462 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 NBL1P41271 181 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 EIF1AXP47813 144 aaKnown RBP11.67□□□□□ -0.54
CPSF4-206ENST00000441580 MMP15P51511 669 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 CLDN20P56880 219 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SOX8P57073 446 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 RAB11BQ15907 218 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 ODF4Q2M2E3 257 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-206ENST00000441580 CORO6Q6QEF8 472 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 CFAP77Q6ZQR2 320 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 ELMOD2Q8IZ81 293 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 GALNT16Q8N428 558 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 DRAXINQ8NBI3 349 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-206ENST00000441580 MDS2Q8NDY4 140 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 OR10S1Q8NGN2 331 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 OR10D3Q8NH80 312 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SMIM4Q8WVI0 70 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 ASB5Q8WWX0 329 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 TMEM45BQ96B21 275 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SLC25A38Q96DW6 304 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 ZNF385AQ96PM9 386 aaKnown RBP11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SIGLEC12Q96PQ1 595 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 TTTY12Q9BZ98 90 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 SLC17A5Q9NRA2 495 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 ASH2LQ9UBL3 628 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
CPSF4-206ENST00000441580 FLVCR1Q9Y5Y0 555 aa11.67□□□□□ -0.54
CPSF4-206ENST00000441580 USP34Q70CQ2 3546 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 A0A0B4J203 849 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 A0A1B0GVI7 797 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 ZNF716A6NP11 495 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 KLRC4-KLRK1H3BQV0 150 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 ACOT7O00154 380 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 SLC17A2O00624 439 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 CXCL13O43927 109 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 SSX4O60224 188 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 CYTIPO60759 359 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 APOC1P02654 83 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 MAS1P04201 325 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 TRAPPC2P0DI81 140 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 TRAPPC2BP0DI82 140 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 CD46P15529 392 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-206ENST00000441580 ART1P52961 327 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 MRPS34P82930 218 aaKnown RBP11.66□□□□□ -0.54
CPSF4-206ENST00000441580 PLGLB1Q02325 96 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 MFAP5Q13361 173 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 HYAL4Q2M3T9 481 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 SPINK14Q6IE38 97 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 LRFN4Q6PJG9 635 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 RDH10Q8IZV5 341 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 MEIOBQ8N635 442 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 OR6M1Q8NGM8 313 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 HAVCR1Q96D42 359 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 AGAP4Q96P64 663 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 NEURL2Q9BR09 285 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 ASCL3Q9NQ33 180 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 TAS2R4Q9NYW5 299 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 OR5V1Q9UGF6 321 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 COL6A3P12111 3177 aa11.66□□□□□ -0.54
CPSF4-206ENST00000441580 CENPXA8MT69 81 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 PLA2G10O15496 165 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 EEF1E1O43324 174 aaKnown RBP11.65□□□□□ -0.54
CPSF4-206ENST00000441580 SYT7O43581 403 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 TTRP02766 147 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 ERCC1P07992 297 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-206ENST00000441580 ACSM4P0C7M7 580 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 CDAP32320 146 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 MAGEB1P43366 347 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 CX3CR1P49238 355 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 SELENOPP49908 381 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 AP3S2P59780 193 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 MADCAM1Q13477 382 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 STK11Q15831 433 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 RIPPLY2Q5TAB7 128 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 AGAP6Q5VW22 663 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 SLC25A25Q6KCM7 469 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 PLET1Q6UQ28 207 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 LINC00696Q6ZRV3 163 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 FCRLAQ7L513 359 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 SULF2Q8IWU5 870 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 UBQLNLQ8IYU4 475 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 CMTM4Q8IZR5 234 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 GPR137CQ8N3F9 429 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 CELF2-AS1Q8N7Q2 184 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 CCDC54Q8NEL0 328 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 GJC3Q8NFK1 279 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 SYNPRQ8TBG9 265 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 NABP1Q96AH0 204 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-206ENST00000441580 S100A16Q96FQ6 103 aaKnown RBP11.65□□□□□ -0.54
CPSF4-206ENST00000441580 THAP7Q9BT49 309 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-206ENST00000441580 ZNF416Q9BWM5 594 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 PLEKHA1Q9HB21 404 aa11.65□□□□□ -0.54
CPSF4-206ENST00000441580 PNRC2Q9NPJ4 139 aaKnown RBP11.65□□□□□ -0.54
CPSF4-206ENST00000441580 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms