RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SMIM10Q96HG1 83 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 ELF4Q99607 663 aaPredicted RBP18.25■□□□□ 0.51
SHOX2-203ENST00000441443 APOOQ9BUR5 198 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.25■□□□□ 0.51
SHOX2-203ENST00000441443 PCDHGA1Q9Y5H4 931 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 NUP210LQ5VU65 1888 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 IGKV1D-42A0A075B6H8 117 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 HRKO00198 91 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 RDH16O75452 317 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 PNPP00491 289 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 RD3LP0DJH9 198 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 APEHP13798 732 aaKnown RBP18.25■□□□□ 0.51
SHOX2-203ENST00000441443 PPICP45877 212 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 CENPAP49450 140 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 SLC25A1P53007 311 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 FABP9Q0Z7S8 132 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 MEP1BQ16820 701 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 ALG11Q2TAA5 492 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 C5orf46Q6UWT4 87 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 FRMD1Q8N878 549 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 NT5CQ8TCD5 201 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 RNF126Q9BV68 326 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 SLC17A5Q9NRA2 495 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 LRIT1Q9P2V4 623 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 PRKNO60260 465 aaPredicted RBP18.25■□□□□ 0.51
SHOX2-203ENST00000441443 TMEM225Q6GV28 225 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 ZNF585AQ6P3V2 769 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 JAGN1Q8N5M9 183 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 OR4C3Q8NH37 302 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 EDARADDQ8WWZ3 215 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 ZC3H10Q96K80 434 aaKnown RBP18.25■□□□□ 0.51
SHOX2-203ENST00000441443 GRHPRQ9UBQ7 328 aa18.25■□□□□ 0.51
SHOX2-203ENST00000441443 H0YIZ8 118 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 HLA-DQA2P01906 255 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 HLA-GP17693 338 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 ADPRHP54922 357 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 TFF2Q03403 129 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 MESTQ5EB52 335 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 TMEM196Q5HYL7 178 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 ZNF704Q6ZNC4 412 aaPredicted RBP18.24■□□□□ 0.51
SHOX2-203ENST00000441443 LPAR3Q9UBY5 353 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 C9JQL5 133 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 STK17BO94768 372 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 SPOCK1Q08629 439 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 TSC22D1Q15714 1073 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 ISXQ2M1V0 245 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 FCRL6Q6DN72 434 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 IL34Q6ZMJ4 242 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 NKX2-4Q9H2Z4 354 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 CACNA1IQ9P0X4 2223 aa18.24■□□□□ 0.51
SHOX2-203ENST00000441443 RNASEK-C17orf49H0YIS7 233 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 K7EQS6 105 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 UBE2CO00762 179 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 CPT2P23786 658 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 ACTR1BP42025 376 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 LSSP48449 732 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 ACTR1AP61163 376 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 INTS14Q96SY0 518 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 PRRT1Q99946 306 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 TIMM29Q9BSF4 260 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 POLE3Q9NRF9 147 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 PRR13Q9NZ81 148 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 DHDHQ9UQ10 334 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 MRPS33Q9Y291 106 aaKnown RBP18.23■□□□□ 0.51
SHOX2-203ENST00000441443 OR10H2O60403 315 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 IL2RAP01589 272 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 HOXB2P14652 356 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 CD80P33681 288 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 CCR4P51679 360 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 ENPP2Q13822 863 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 GPR18Q14330 331 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 KLHL26Q53HC5 615 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 FJX1Q86VR8 437 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 SPACA7Q96KW9 195 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 GPX7Q96SL4 187 aaPredicted RBP18.23■□□□□ 0.51
SHOX2-203ENST00000441443 RSRP1Q9BUV0 290 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 SMCO4Q9NRQ5 59 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 CYR61O00622 381 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 RCBTB1Q8NDN9 531 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 HIST1H2BAQ96A08 127 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 TM4SF19Q96DZ7 209 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 RNF122Q9H9V4 155 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 STARD5Q9NSY2 213 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 PILRAQ9UKJ1 303 aa18.23■□□□□ 0.51
SHOX2-203ENST00000441443 KLF8O95600 359 aaPredicted RBP18.22■□□□□ 0.51
SHOX2-203ENST00000441443 PLGP00747 810 aaPredicted RBP18.22■□□□□ 0.51
SHOX2-203ENST00000441443 COL9A1P20849 921 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 TACR3P29371 465 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 ID4P47928 161 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 EGR3Q06889 387 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 TRAPPC6BQ86SZ2 158 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 NUDCD2Q8WVJ2 157 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 PMM1Q92871 262 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 CTHRC1Q96CG8 243 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 TSPAN32Q96QS1 320 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 SPSB2Q99619 263 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 OR51M1Q9H341 326 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 SRMSQ9H3Y6 488 aa18.22■□□□□ 0.51
SHOX2-203ENST00000441443 NOSIPQ9Y314 301 aaKnown RBP18.22■□□□□ 0.51
SHOX2-203ENST00000441443 LAMA1P25391 3075 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms