RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
SYNE2-206ENST00000441438 PPP3R1P63098 170 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 HHEXQ03014 270 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 SPRED2Q7Z698 418 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 RNF149Q8NC42 400 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 NOXO1Q8NFA2 376 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 KIAA1456Q9P272 454 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 RIMS3Q9UJD0 308 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 A0A1W2PPV9 198 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 A0A1W2PR80 420 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF878C9JN71 531 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 H3BSA7 217 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 K7ERU9 68 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 HPGDSO60760 199 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 DUSP11O75319 330 aaKnown RBP9.38□□□□□ -0.91
SYNE2-206ENST00000441438 KLK1P06870 262 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 CTSBP07858 339 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 CSF3P09919 207 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 DUX4L4P0CJ87 422 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 PBX2P40425 430 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 MICAQ29983 383 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 VMACQ2NL98 169 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 GLYR1Q49A26 553 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-206ENST00000441438 TAPT1Q6NXT6 567 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 TIFABQ6ZNK6 161 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 CDHR3Q6ZTQ4 885 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 OR5J2Q8NH18 312 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 FCRL5Q96RD9 977 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 SEPHS2Q99611 448 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 SPHK2Q9NRA0 654 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 KLRF1Q9NZS2 232 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 MCM3APO60318 1980 aa9.38□□□□□ -0.91
SYNE2-206ENST00000441438 SLC22A23A1A5C7 686 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 DHRS7CA6NNS2 312 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 F6UZH7 168 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 SLC16A5O15375 505 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 ADORA2BP29275 332 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 HPCAL1P37235 193 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 DNASE1L1P49184 302 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 NOXA1Q86UR1 476 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 OR56A4Q8NGH8 313 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 OR52I1Q8NGK6 324 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 GGHQ92820 318 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RAB8BQ92930 207 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 FGF21Q9NSA1 209 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 SLC17A4Q9Y2C5 497 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D3DA0A087WVF3 549 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 HMX2A2RU54 273 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 AQP7P3A6NL99 342 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D3LB9A6J9 549 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 M0R3G1 203 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 THY1P04216 161 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 SERPINA7P05543 415 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 MAKP20794 623 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 OR2B8PP59922 312 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 HSPB3Q12988 150 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF234Q14588 700 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 NSDHLQ15738 373 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 TBR1Q16650 682 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RAB6CQ53S08 254 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D3CQ6IPX1 549 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 PWWP2BQ6NUJ5 590 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 TBC1D3Q8IZP1 549 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-206ENST00000441438 ASB10Q8WXI3 467 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 CPXM1Q96SM3 734 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RAB11FIP5Q9BXF6 653 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RAB6CQ9H0N0 254 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 PTGES2Q9H7Z7 377 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 PAK1IP1Q9NWT1 392 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-206ENST00000441438 J3QRK9 145 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 ISG15P05161 165 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 ADH4P08319 380 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 TSPAN19P0C672 248 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RPL10P27635 214 aaKnown RBP9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RPL22P35268 128 aaKnown RBP9.37□□□□□ -0.91
SYNE2-206ENST00000441438 GSK3BP49841 420 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 OR4A4PQ8NGN8 299 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 FBXL8Q96CD0 374 aa9.37□□□□□ -0.91
SYNE2-206ENST00000441438 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
SYNE2-206ENST00000441438 PDE4DIPQ5VU43 2346 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 TCRBV5S1A1TA0A578 114 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 MBD3L5A6NJ08 208 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 C3orf70A6NLC5 250 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 PRNPP04156 253 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 BCHEP06276 602 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 OR56A5P0C7T3 313 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 MPZP25189 248 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 GLP1RP43220 463 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 NUMBP49757 651 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 RPS15AP62244 130 aaKnown RBP9.36□□□□□ -0.91
SYNE2-206ENST00000441438 TBPL1P62380 186 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 TAF9Q16594 264 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 SPEM1Q8N4L4 309 aa9.36□□□□□ -0.91
SYNE2-206ENST00000441438 P2RX4Q99571 388 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms