RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 COG8Q96MW5 612 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 IL1RAPQ9NPH3 570 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 ZDHHC8Q9ULC8 765 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 CUBNO60494 3623 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 ISPDA4D126 451 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 IMPA2O14732 288 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 ICMTO60725 284 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 MPZL1O95297 269 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 TXNDC12O95881 172 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 TNFSF4P23510 183 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 CDKN2AP42771 156 aaKnown RBP16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 MMP15P51511 669 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 FXYD6P3P58550 94 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 RFX4Q33E94 735 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 MTX3Q5HYI7 312 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 PEG10Q86TG7 708 aaKnown RBP16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 OR4K13Q8NH42 304 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 OR1F12Q8NHA8 337 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 SPATA3Q8NHX4 192 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 GNPDA2Q8TDQ7 276 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 CCL17Q92583 94 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 RAB1CQ92928 201 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 SAMD8Q96LT4 415 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 DIRC2Q96SL1 478 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 GPA33Q99795 319 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 FUZQ9BT04 418 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 MSL2Q9HCI7 577 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 TBCCD1Q9NVR7 557 aa16.9■□□□□ 0.3
SHROOM1-204ENST00000440118 B2RBV5 119 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 WNT9BO14905 357 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 HLA-DQA2P01906 255 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 MSMBP08118 114 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 GAAP10253 952 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 TNFAIP6P98066 277 aaPredicted RBP16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 SLC3A1Q07837 685 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 SLC7A6Q92536 515 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 TMEM186Q96B77 213 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 TSSK2Q96PF2 358 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 CCT8L2Q96SF2 557 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 NMNAT3Q96T66 252 aa16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 SRA1Q9HD15 236 aaKnown RBP16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 RPRD1BQ9NQG5 326 aaKnown RBP16.89■□□□□ 0.29
SHROOM1-204ENST00000440118 STAB1Q9NY15 2570 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 OR6C6A6NF89 314 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 FAM157AC9JC47 383 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 RER1O15258 196 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 KRT36O76013 467 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 GPANK1O95872 356 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 ATP6V1B2P21281 511 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 TUBG1P23258 451 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 MEP1BQ16820 701 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 CLEC12AQ5QGZ9 265 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 ZNF771Q7L3S4 317 aaPredicted RBP16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 GJC3Q8NFK1 279 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 C1orf159Q96HA4 380 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 NSL1Q96IY1 281 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 GAL3ST1Q99999 423 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 REPIN1Q9BWE0 567 aaKnown RBP16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 CDADC1Q9BWV3 514 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 RACGAP1Q9H0H5 632 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 HDHD2Q9H0R4 259 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 TUBG2Q9NRH3 451 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 HIF1ANQ9NWT6 349 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 ACTR3BQ9P1U1 418 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 WIPI2Q9Y4P8 454 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 CACNG2Q9Y698 323 aa16.88■□□□□ 0.29
SHROOM1-204ENST00000440118 DYSFO75923 2080 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 TNFRSF11BO00300 401 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 ARPC3O15145 178 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 ANPEPP15144 967 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 HIST1H1CP16403 213 aaKnown RBP16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 RGS6P49758 472 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 TSPAN31Q12999 210 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 PSG7Q13046 419 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 SLC36A3Q495N2 470 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 TMEM255AQ5JRV8 349 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 RPL13AP3Q6NVV1 102 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 PGBD2Q6P3X8 592 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 ZNF620Q6ZNG0 422 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 ARHGAP24Q8N264 748 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 LINC00471Q8N535 108 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 FITM2Q8N6M3 262 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 SDR9C7Q8NEX9 313 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 OR2Z1Q8NG97 314 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 OR5L1Q8NGL2 311 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 OR2AJ1Q8NGZ0 328 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 CMBLQ96DG6 245 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 MUC13Q9H3R2 512 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 FN3KQ9H479 309 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 ZNF665Q9H7R5 613 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 ATPIF1Q9UII2 106 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 PURGQ9UJV8 347 aaKnown RBP16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 WNK2Q9Y3S1 2297 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 SVEP1Q4LDE5 3571 aa16.87■□□□□ 0.29
SHROOM1-204ENST00000440118 THBS2P35442 1172 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 GSSP48637 474 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 CCDC92Q53HC0 331 aaPredicted RBP16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 SLC35F1Q5T1Q4 408 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms