RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MRPS10P82664 201 aaKnown RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 HNF4GQ14541 408 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 METAP1DQ6UB28 335 aaPredicted RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 HSPB11Q9Y547 144 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 SLCO1B1Q9Y6L6 691 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 TNFAIP6P98066 277 aaPredicted RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 SLC30A7Q8NEW0 376 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 OPALINQ96PE5 141 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 ADAT1Q9BUB4 502 aaKnown RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 SLC25A31Q9H0C2 315 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 GAPDHSO14556 408 aaPredicted RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 GABRA5P31644 462 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.66
NEK1-201ENST00000439128 ACTBL2Q562R1 376 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 APOBEC3DQ96AK3 386 aaPredicted RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 CCDC32Q9BV29 185 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 GPR84Q9NQS5 396 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 PRDM7Q9NQW5 492 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 CGGBP1Q9UFW8 167 aaPredicted RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 OSGIN1Q9UJX0 560 aa10.94□□□□□ -0.66
NEK1-201ENST00000439128 TNS1Q9HBL0 1735 aaKnown RBP10.94□□□□□ -0.66
NEK1-201ENST00000439128 ZC3H12DA2A288 527 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 GPX2P18283 190 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 HCCSP53701 268 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 KLF3P57682 345 aaPredicted RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 MC2RQ01718 297 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 COX14Q96I36 57 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 NIPSNAP1Q9BPW8 284 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 LOC107986453A0A1B0GWG9 222 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 ARPC1BO15143 372 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 DNASE1P24855 282 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 MRPL19P49406 292 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 ZNF117Q03924 483 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 MICBQ29980 383 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 ZNF691Q5VV52 312 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 NKAIN3Q8N8D7 197 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 OR52H1Q8NGJ2 320 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 OR2A5Q96R48 311 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 RGCCQ9H4X1 137 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 SPACA1Q9HBV2 294 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 NECAP2Q9NVZ3 263 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 GMPR2Q9P2T1 348 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 ATP1B1P05026 303 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 ACHEP22303 614 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 MLLT11Q13015 90 aaPredicted RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 ZNF181Q2M3W8 571 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 GRPEL2Q8TAA5 225 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 MOV10Q9HCE1 1003 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 MYO18AQ92614 2054 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 TRGV10A0A0A0MS01 117 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 A0A1B0GTH9 108 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 GALNSP34059 522 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 YBX1P67809 324 aaKnown RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 OGFOD3Q6PK18 319 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 ZNF679Q8IYX0 411 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 POC1BQ8TC44 478 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 COPS3Q9UNS2 423 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 CACNG2Q9Y698 323 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 UBBP0CG47 229 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 BAXQ07812 192 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 GDPGP1Q6ZNW5 385 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 MBOAT4Q96T53 435 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 C19orf43Q9BQ61 176 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 THAP7Q9BT49 309 aaPredicted RBP10.93□□□□□ -0.66
NEK1-201ENST00000439128 MOB1AQ9H8S9 216 aa10.93□□□□□ -0.66
NEK1-201ENST00000439128 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 FABP1P07148 127 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 RAB40ALP0C0E4 278 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 F2RP25116 425 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 ZFP36L2P47974 494 aaKnown RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 CDC20Q12834 499 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 TBRG1Q3YBR2 411 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 YIF1BQ5BJH7 314 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PRAMEF5Q5TYX0 476 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PRAMEF6Q5VXH4 476 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 H2BFWTQ7Z2G1 175 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GTPBP8Q8N3Z3 284 aaPredicted RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 RAB40AQ8WXH6 277 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 TAS2R4Q9NYW5 299 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GLTPQ9NZD2 209 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 GPR55Q9Y2T6 319 aaPredicted RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 A0A087WUJ7 227 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 A0A1W2PRD5 423 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 A0A1W2PRF3 423 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 A0A1W2PRM7 423 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 A1L4Q6 167 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 ZNF705EA8MWA4 302 aaPredicted RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 B4E171 279 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PHF1O43189 567 aaPredicted RBP10.92□□□□□ -0.66
NEK1-201ENST00000439128 MT-ND4P03905 459 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 OR8U8P0C7N1 319 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 PNLIPP16233 465 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 NAGAP17050 411 aa10.92□□□□□ -0.66
NEK1-201ENST00000439128 POU3F3P20264 500 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms