RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OR10A3P58181 314 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 SORDQ00796 357 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 MYBPHQ13203 477 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 IL10RAQ13651 578 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 ABCA11PQ4W5N1 156 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 COMTD1Q86VU5 262 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 ZNF679Q8IYX0 411 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CNEP1R1Q8N9A8 125 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 OR51D1Q8NGF3 324 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 OR2Y1Q8NGV0 311 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 MFSD8Q8NHS3 518 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 VOPP1Q96AW1 172 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CTHRC1Q96CG8 243 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 BORCS8Q96FH0 119 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 NIPAL2Q9H841 368 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 NOX3Q9HBY0 568 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CDH23Q9H251 3354 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 VCANP13611 3396 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 IGHV3-15A0A0B4J1V0 119 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 F8W036 122 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 OIP5O43482 229 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CBR3O75828 277 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CBX5P45973 191 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 BLOC1S1P78537 153 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 RSU1Q15404 277 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 TSC22D1Q15714 1073 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 ATG4DQ86TL0 474 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 MAML2Q8IZL2 1156 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 ZNF721Q8TF20 911 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 CLDN23Q96B33 292 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 FGGYQ96C11 551 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 LOXL4Q96JB6 756 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 RASL10BQ96S79 203 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 LIN7BQ9HAP6 207 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 HDGFL3Q9Y3E1 203 aa10.43□□□□□ -0.74
TRAPPC9-202ENST00000438773 LOC102725191A0A1B0GVB3 256 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 FTCDNL1E5RQL4 147 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 TCRBP04435 133 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 PNLIPP16233 465 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 ELK1P19419 428 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 PCBD1P61457 104 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 MFAP5Q13361 173 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 GPR176Q14439 515 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 LAMTOR1Q6IAA8 161 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 TMEM205Q6UW68 189 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 WDR88Q6ZMY6 472 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 C17orf107Q6ZR85 190 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 PTP4A1Q93096 173 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 SCGB3A2Q96PL1 93 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 OR51B6Q9H340 312 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 KCNE5Q9UJ90 142 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 SLC22A13Q9Y226 551 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 TEX13DA0A0J9YY54 714 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 FAM230AA0A1W2PPH8 454 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 A0A1W2PQM1 296 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 SHISA3A0PJX4 238 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 WRBO00258 174 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 BHLHE40O14503 412 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 SP9P0CG40 484 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 CD53P19397 219 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 TGFBR3Q03167 851 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 SKP2Q13309 424 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 CEBPEQ15744 281 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 ZNF813Q6ZN06 617 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 MRPL21Q7Z2W9 205 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 TMEM178AQ8NBL3 297 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 MED30Q96HR3 178 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 IP6K3Q96PC2 410 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 LANCL2Q9NS86 450 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 DSPPQ9NZW4 1301 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 KLK10O43240 276 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 HTR3BO95264 441 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 LALBAP00709 142 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 AMY2BP19961 511 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 OPCMLQ14982 345 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 DNAAF1Q8NEP3 725 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 GJC3Q8NFK1 279 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 STOML3Q8TAV4 291 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 NANOS1Q8WY41 292 aaKnown RBP10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 FOXRED1Q96CU9 486 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 OXGR1Q96P68 337 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 PRSS27Q9BQR3 290 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 NTMQ9P121 344 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 HIF3AQ9Y2N7 669 aa10.42□□□□□ -0.74
TRAPPC9-202ENST00000438773 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 RAB3DO95716 219 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 UBCP0CG48 685 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 CBR1P16152 277 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 GDNFP39905 211 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 MRPS10P82664 201 aaKnown RBP10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 ZNF616Q08AN1 781 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 GLYATL3Q5SZD4 288 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 THEM4Q5T1C6 240 aa10.41□□□□□ -0.74
TRAPPC9-202ENST00000438773 COX15Q7KZN9 410 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms