RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ECSITQ9BQ95 431 aa8.68□□□□□ -1.02
RTN4-211ENST00000438462 REEP4Q9H6H4 257 aa8.68□□□□□ -1.02
RTN4-211ENST00000438462 RNF7Q9UBF6 113 aa8.68□□□□□ -1.02
RTN4-211ENST00000438462 KAAG1Q9UBP8 84 aa8.68□□□□□ -1.02
RTN4-211ENST00000438462 PRPF19Q9UMS4 504 aaKnown RBP8.68□□□□□ -1.02
RTN4-211ENST00000438462 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 IGHV3OR15-7A0A075B7D8 119 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 RTL8CO15255 209 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 TBX19O60806 448 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 HLA-DPB1P04440 258 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 TPM3P06753 285 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 CRABP2P29373 138 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 ZNF75DP51815 510 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 RAD23AP54725 363 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 LGALS4P56470 323 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 GUCY2DQ02846 1103 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 ECH1Q13011 328 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 MAB21L1Q13394 359 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 WBP2NLQ6ICG8 309 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 PDIK1LQ8N165 341 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 FAM216BQ8N7L0 139 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 ADPRHL1Q8NDY3 354 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 OR8G5Q8NG78 346 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 METTL6Q8TCB7 284 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 CPNE1Q99829 537 aa8.67□□□□□ -1.02
RTN4-211ENST00000438462 A0A1W2PQ09 198 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 GKN3PP0CG01 181 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 JUNBP17275 347 aaPredicted RBP8.66□□□□□ -1.02
RTN4-211ENST00000438462 AZGP1P25311 298 aaKnown RBP8.66□□□□□ -1.02
RTN4-211ENST00000438462 GGT2P36268 569 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 GSK3BP49841 420 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 PSG4Q00888 419 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 FUT5Q11128 374 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 BLMHQ13867 455 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 KRT72Q14CN4 511 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 FASTKD3Q14CZ7 662 aaKnown RBP8.66□□□□□ -1.02
RTN4-211ENST00000438462 LSM12Q3MHD2 195 aaKnown RBP8.66□□□□□ -1.02
RTN4-211ENST00000438462 OR2T2Q6IF00 324 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 KLC3Q6P597 504 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 BHLHE23Q8NDY6 225 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 OR5D13Q8NGL4 314 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 FAM76AQ8TAV0 307 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 SFXN5Q8TD22 340 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 BCAS4Q8TDM0 211 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 ERGIC1Q969X5 290 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 KCNA7Q96RP8 456 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 CDRT15Q96T59 188 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 CCL13Q99616 98 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
RTN4-211ENST00000438462 KCNN2Q9H2S1 579 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
RTN4-211ENST00000438462 DUXAA6NLW8 204 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 H0YAE9 185 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 DNALI1O14645 258 aaPredicted RBP8.65□□□□□ -1.02
RTN4-211ENST00000438462 SAP30O75446 220 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 MATN1P21941 496 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 COX7A1P24310 79 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 ERVK-25P63136 954 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 IKZF1Q13422 519 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 NAB1Q13506 487 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 IMPG1Q17R60 797 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 MRPL2Q5T653 305 aaKnown RBP8.65□□□□□ -1.02
RTN4-211ENST00000438462 FAM69AQ5T7M9 428 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 ACP7Q6ZNF0 438 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 NUDCD3Q8IVD9 361 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 CLDN22Q8N7P3 220 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 FBXO36Q8NEA4 188 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 TAAR8Q969N4 342 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 EME1Q96AY2 570 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 TSSK3Q96PN8 268 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 SPATA9Q9BWV2 254 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 WNT5BQ9H1J7 359 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 DCLRE1BQ9H816 532 aa8.65□□□□□ -1.02
RTN4-211ENST00000438462 SIRT4Q9Y6E7 314 aaPredicted RBP8.65□□□□□ -1.02
RTN4-211ENST00000438462 TNCP24821 2201 aa8.65□□□□□ -1.03
RTN4-211ENST00000438462 A0A087WUJ7 227 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 FAM90A8PA6NJQ4 464 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 C16orf90A8MZG2 172 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 C12orf77C9JDV5 145 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 XRCC3O43542 346 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 GLCEO94923 617 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 IPO7O95373 1038 aaKnown RBP8.64□□□□□ -1.03
RTN4-211ENST00000438462 ARSBP15848 533 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 SOAT1P35610 550 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 COPZ1P61923 177 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 PUDPQ08623 228 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 KIR2DS1Q14954 304 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 SSX2Q16385 188 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 C9orf152Q5JTZ5 239 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 GPRIN3Q6ZVF9 776 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 SLC30A8Q8IWU4 369 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 MKXQ8IYA7 352 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 OR6S1Q8NH40 331 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 PSMA8Q8TAA3 256 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 ZNF566Q969W8 418 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 ROPN1LQ96C74 230 aa8.64□□□□□ -1.03
RTN4-211ENST00000438462 FOXRED1Q96CU9 486 aaPredicted RBP8.64□□□□□ -1.03
RTN4-211ENST00000438462 DUS3LQ96G46 650 aaKnown RBP8.64□□□□□ -1.03
RTN4-211ENST00000438462 ZNF582Q96NG8 517 aaPredicted RBP8.64□□□□□ -1.03
RTN4-211ENST00000438462 POLE3Q9NRF9 147 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms