RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MRPS18BQ9Y676 258 aaKnown RBP8.47□□□□□ -1.05
CUX1-206ENST00000437600 COL27A1Q8IZC6 1860 aaPredicted RBP8.46□□□□□ -1.05
CUX1-206ENST00000437600 IGLV3-12A0A075B6K2 115 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 SPAARA0A1B0GVQ0 90 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 ZNF814B7Z6K7 855 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 TEX46H3BTG2 121 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 TRIM77I1YAP6 450 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 KRT33AO76009 404 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 ICAM2P13598 275 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 PSMB1P20618 241 aaKnown RBP8.46□□□□□ -1.05
CUX1-206ENST00000437600 ARHGDIBP52566 201 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 TLE3Q04726 772 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 FOXF1Q12946 379 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 SGCBQ16585 318 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 JAGN1Q8N5M9 183 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 GALNT11Q8NCW6 608 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 LIPHQ8WWY8 451 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 C4orf45Q96LM5 186 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 ATG5Q9H1Y0 275 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 ZNF224Q9NZL3 707 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 KLHL9Q9P2J3 617 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 NUBP2Q9Y5Y2 271 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 MYO7BQ6PIF6 2116 aa8.46□□□□□ -1.05
CUX1-206ENST00000437600 P2RY10O00398 339 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ADAM10O14672 748 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 PDCD5O14737 125 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 NPIPB7O75200 414 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 TXNDC12O95881 172 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 F10P00742 488 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ZNF81P51508 661 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ZNF704Q6ZNC4 412 aaPredicted RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 GRINAQ7Z429 371 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ZNF679Q8IYX0 411 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 C9orf62Q8N4C0 152 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ZNF248Q8NDW4 579 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 SVIPQ8NHG7 77 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 CMBLQ96DG6 245 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 DOCK7Q96N67 2140 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 OR8B4Q96RC9 309 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 TGIF2Q9GZN2 237 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 TXNIPQ9H3M7 391 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 PPIEQ9UNP9 301 aaKnown RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 PIEZO2Q9H5I5 2752 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 IGLV1-36A0A0B4J1U3 117 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 PYCARD-AS1I3L0S3 204 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 TRIM3O75382 744 aaPredicted RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 SLC6A8P48029 635 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 PRKXP51817 358 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 BIDP55957 195 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 SLC26A5P58743 744 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 DCAF7P61962 342 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 PUDPQ08623 228 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ACACAQ13085 2346 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ISXQ2M1V0 245 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 C2orf68Q2NKX9 166 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 MOGAT2Q3SYC2 334 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 LGALSLQ3ZCW2 172 aaPredicted RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 LIX1LQ8IVB5 337 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 OR1J4Q8NGS1 313 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ASB5Q8WWX0 329 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 HAVCR1Q96D42 359 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 SLC25A44Q96H78 314 aaPredicted RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 JSRP1Q96MG2 331 aaPredicted RBP8.46□□□□□ -1.06
CUX1-206ENST00000437600 CMKLR1Q99788 373 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 EMC7Q9NPA0 242 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 SLC39A1Q9NY26 324 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 ING4Q9UNL4 249 aa8.46□□□□□ -1.06
CUX1-206ENST00000437600 TMEM269A0A1B0GVZ9 245 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 M0QYG6 137 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 NTN3O00634 580 aaPredicted RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 CD3DP04234 171 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 KLK3P07288 261 aaPredicted RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 GUSBP08236 651 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 PRSS12P56730 875 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 GLO1Q04760 184 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 GPR139Q6DWJ6 353 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 SLC18B1Q6NT16 456 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 DBX2Q6ZNG2 339 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 BTN2A1Q7KYR7 527 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 ASCL5Q7RTU5 278 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 ZNF519Q8TB69 540 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 MIB2Q96AX9 1013 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 FAM3DQ96BQ1 224 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 MRPL48Q96GC5 212 aaKnown RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 MYOTQ9UBF9 498 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 FARSAQ9Y285 508 aaKnown RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 NUP210LQ5VU65 1888 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 IGHV3-15A0A0B4J1V0 119 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 TRBV5-5A0A0J9YX44 114 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 NPIPA5E9PKD4 350 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 GABARAPH6UMI1 98 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 EIF4E2O60573 245 aaKnown RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 SLC22A5O76082 557 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 CFDP00746 253 aaPredicted RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 ZNF823P16415 610 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 DNASE1P24855 282 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 GNALP38405 381 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 GPR85P60893 370 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms