RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 CCR8P51685 355 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 MLF1P58340 268 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 SELENBP1Q13228 472 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 TRAM2Q15035 370 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF77Q15935 545 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 EXOC3L4Q17RC7 722 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 LY6G6FQ5SQ64 297 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 REEP3Q6NUK4 255 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 NCCRP1Q6ZVX7 275 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 USP50Q70EL3 339 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 FAM220AQ7Z4H9 259 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 APRG1Q8IVJ8 170 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF786Q8N393 782 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 TRAM1L1Q8N609 369 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 TTC29Q8NA56 475 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF740Q8NDX6 193 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 FAM110BQ8TC76 370 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 CMTM7Q96FZ5 175 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 DUS3LQ96G46 650 aaKnown RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 DCUN1D5Q9BTE7 237 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 RACGAP1Q9H0H5 632 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 C1orf198Q9H425 327 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 KIR3DX1Q9H7L2 352 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 TRIM45Q9H8W5 580 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 PRSS16Q9NQE7 514 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 NECAP2Q9NVZ3 263 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF282Q9UDV7 671 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 CLEC2DQ9UHP7 191 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 PRG3Q9Y2Y8 225 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 CDH10Q9Y6N8 788 aa3.31□□□□□ -1.88
HMGB1P45-201ENST00000435986 AQRO60306 1485 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 NSG1A0A0A6YYJ2 146 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 TRBV9A0A0B4J1U6 114 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 A0A0G2JRQ6 117 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 A0A0J9YXY3 114 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 A0A1B0GTI1 187 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 GOLGA6L10A6NI86 522 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 LRRN3E7EW58 273 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF780AO75290 641 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 PSIP1O75475 530 aaKnown RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZMPSTE24O75844 475 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR7A10O76100 309 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 BRI3O95415 125 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 LDOC1O95751 146 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 IFNA6P05013 189 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 GIG44P09565 113 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 GOLGA8HP0CJ92 632 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 SMIM10L1P0DMW3 83 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 CXCR2P25025 360 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 TEAD1P28347 426 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 FMO3P31513 532 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 KDELR2P33947 212 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 CSKP41240 450 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 SLC1A1P43005 524 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 GPR1P46091 355 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 DLX1P56177 255 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 AP3S2P59780 193 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 RPS14P62263 151 aaKnown RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 RPL10AP62906 217 aaKnown RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 TNXAQ16473 311 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 C1orf100Q5SVJ3 147 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 PRMT9Q6P2P2 845 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 RNF165Q6ZSG1 346 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF621Q6ZSS3 439 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 BOD1L2Q8IYS8 172 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 C19orf18Q8NEA5 215 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR6N2Q8NGY6 317 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 PLPPR1Q8TBJ4 325 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 LGALS14Q8TCE9 139 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 CHCHD10Q8WYQ3 142 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 ISOC2Q96AB3 205 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 APH1AQ96BI3 265 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 SMIM10Q96HG1 83 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 OXGR1Q96P68 337 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 SORT1Q99523 831 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 PIGUQ9H490 435 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 NXF3Q9H4D5 531 aaKnown RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 WDR55Q9H6Y2 383 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 WDR54Q9H977 334 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 SAMSN1Q9NSI8 373 aaKnown RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 C3orf18Q9UK00 162 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 NXT1Q9UKK6 140 aaKnown RBP3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 HYOU1Q9Y4L1 999 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 LRRC42Q9Y546 428 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 SAR1BQ9Y6B6 198 aa3.3□□□□□ -1.88
HMGB1P45-201ENST00000435986 PLEKHG1Q9ULL1 1385 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 A0A1W2PRF3 423 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 A0A1W2PRM7 423 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 B4GALT5O43286 388 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 AQP9O43315 295 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 DENRO43583 198 aaKnown RBP3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 DEXIO95424 95 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 SLC35E2BP0CK96 405 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 PET100P0DJ07 73 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 PSMC3P17980 439 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 CEACAM3P40198 252 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 GSSP48637 474 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 TGM4P49221 684 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms