RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZDHHC4Q9NPG8 344 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 TMEM9BQ9NQ34 198 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 CCDC59Q9P031 241 aaKnown RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 SLC17A7Q9P2U7 560 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 XCL2Q9UBD3 114 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 DCDC2Q9UHG0 476 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF223Q9UK11 482 aaPredicted RBP1.85□□□□□ -2.11
PTPN4-205ENST00000433888 CEMIPQ8WUJ3 1361 aa1.85□□□□□ -2.11
PTPN4-205ENST00000433888 KCNE1BA0A087WTH5 132 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 A0A1B0GUH1 482 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 FAM166BA8MTA8 275 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 SMKR1H3BMG3 65 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 DYNC1I1O14576 645 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 SCAMP2O15127 329 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 HCRTR1O43613 425 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 ENSAO43768 121 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CD5LO43866 347 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 BBOX1O75936 387 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 LSM8O95777 96 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 PTTG1O95997 202 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 NPPAP01160 153 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 HLA-HP01893 362 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CCDC172P0C7W6 258 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 UBTFL6P0CB48 400 aaPredicted RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 ICAM2P13598 275 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF30P17039 623 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 PRKACAP17612 351 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 AK4P27144 223 aaPredicted RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 HRH1P35367 487 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 GPR1P46091 355 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 TFPI2P48307 235 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CSNK1DP48730 415 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 HADHBP55084 474 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 DLX1P56177 255 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 NUP107P57740 925 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 STXBP1P61764 594 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CACNG7P62955 275 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 PAFAH1B2P68402 229 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 MXD1Q05195 221 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 TWF1Q12792 350 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 MAB21L1Q13394 359 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 SNRNP35Q16560 246 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 RPEL1Q2QD12 228 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 NDUFAF6Q330K2 333 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 LRRC10Q5BKY1 277 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 IGFL1Q6UW32 110 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 GDPD3Q7L5L3 318 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 OAFQ86UD1 273 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CBLN2Q8IUK8 224 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 KIF2BQ8N4N8 673 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 MREGQ8N565 214 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CSGALNACT2Q8N6G5 542 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 OTUD6BQ8N6M0 293 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 C8orf31Q8N9H6 132 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 SNX31Q8N9S9 440 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 NKAPP1Q8N9T2 125 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 GPR26Q8NDV2 337 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CCDC54Q8NEL0 328 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 OR4F15Q8NGB8 312 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 NEIL3Q8TAT5 605 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 ASZ1Q8WWH4 475 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 DEDD2Q8WXF8 326 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 BAALCQ8WXS3 180 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 TFGQ92734 400 aaPredicted RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 FAM3DQ96BQ1 224 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 SMIM14Q96QK8 99 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 FOXC2Q99958 501 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 MICU1Q9BPX6 476 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 HDHD3Q9BSH5 251 aaPredicted RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 RIOK2Q9BVS4 552 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 OSBPL10Q9BXB5 764 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 IL22Q9GZX6 179 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 DEFB127Q9H1M4 99 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 SLC25A22Q9H936 323 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 LZTFL1Q9NQ48 299 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 ZC4H2Q9NQZ6 224 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 CTPS2Q9NRF8 586 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 LGALS13Q9UHV8 139 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 ZNF229Q9UJW7 825 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 NAP1L2Q9ULW6 460 aaPredicted RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 RBMX2Q9Y388 322 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 UBIAD1Q9Y5Z9 338 aa1.84□□□□□ -2.11
PTPN4-205ENST00000433888 BZW2Q9Y6E2 419 aaKnown RBP1.84□□□□□ -2.11
PTPN4-205ENST00000433888 MROH5Q6ZUA9 1318 aa1.84□□□□□ -2.12
PTPN4-205ENST00000433888 NEURL4Q96JN8 1562 aa1.84□□□□□ -2.12
PTPN4-205ENST00000433888 ITGB4P16144 1822 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 IGLV4-60A0A075B6I1 120 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 IGKV1D-17A0A075B6S4 117 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 GJE1A6NN92 205 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 H0YHG0 523 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 NME4O00746 187 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 NDUFAB1O14561 156 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 TRDMT1O14717 391 aaKnown RBP1.83□□□□□ -2.12
PTPN4-205ENST00000433888 MRPS12O15235 138 aaKnown RBP1.83□□□□□ -2.12
PTPN4-205ENST00000433888 KDELR3O43731 214 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 FAM189A1O60320 539 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 NMT2O60551 498 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 MPDU1O75352 247 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 HSBP1O75506 76 aa1.83□□□□□ -2.12
PTPN4-205ENST00000433888 SRP72O76094 671 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms