RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MT-ND4LP03901 98 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SFTPBP07988 381 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 MELTFP08582 738 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 OR8U8P0C7N1 319 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 PRF1P14222 555 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 TACR3P29371 465 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 NPY4RP50391 375 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SSBP1Q04837 148 aaKnown RBP10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SKP2Q13309 424 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 MEF2DQ14814 521 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 FHL5Q5TD97 284 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 TTLL10Q6ZVT0 673 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 STACQ99469 402 aa10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 SEBOXQ9HB31 216 aaPredicted RBP10.4□□□□□ -0.74
HMGCS1-202ENST00000433297 DOCK9Q9BZ29 2069 aa10.4□□□□□ -0.75
HMGCS1-202ENST00000433297 NUDT19A8MXV4 375 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 HRKO00198 91 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 CTSVO60911 334 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 RHOP08100 348 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 OR8U9P0C7N5 309 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 GNB3P16520 340 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 LAP3P28838 519 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SCAND1P57086 179 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 PRICKLE4Q2TBC4 344 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 Q6ZRG5 221 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 OR8U1Q8NH10 309 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SPACA7Q96KW9 195 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 EDEM2Q9BV94 578 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 GGACTQ9BVM4 153 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 WIF1Q9Y5W5 379 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SPACA6W5XKT8 324 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 EDDM13A0A1B0GTR0 161 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 MED19A0JLT2 244 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 GPR75O95800 540 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 RENP00797 406 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 HOXB5P09067 269 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 ACKR3P25106 362 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 PSG6Q00889 435 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 PDGFRLQ15198 375 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 ASPHD2Q6ICH7 369 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF425Q6IV72 752 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 GALNTL5Q7Z4T8 443 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 TAF8Q7Z7C8 310 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 RTN4RL2Q86UN3 420 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 MRGPRFQ96AM1 343 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SRMSQ9H3Y6 488 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 AMDHD2Q9Y303 409 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 AK1P00568 194 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 CISD3P0C7P0 127 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 PVRP15151 417 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 RAB5AP20339 215 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 GLP1RP43220 463 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 RPS15AP62244 130 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SRSF4Q08170 494 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF616Q08AN1 781 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 TMEM52BQ4KMG9 183 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 AKR7LQ8NHP1 331 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 LRRC3BQ96PB8 259 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 ZNF587Q96SQ5 575 aaPredicted RBP10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 RAB33BQ9H082 229 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SLCO5A1Q9H2Y9 848 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 SPACA1Q9HBV2 294 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 METTL1Q9UBP6 276 aaKnown RBP10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 DTX4Q9Y2E6 619 aa10.39□□□□□ -0.75
HMGCS1-202ENST00000433297 LRRK1Q38SD2 2015 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 A0A087WV62 115 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 A0A1W2PPE2 198 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 LMX1BO60663 402 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 DUS4LO95620 317 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 FBP1P09467 338 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 FOLR2P14207 255 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 HPGDP15428 266 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 GNALP38405 381 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 GSK3AP49840 483 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 MFGE8Q08431 387 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 RAB32Q13637 225 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 ALG11Q2TAA5 492 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 CLEC9AQ6UXN8 241 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 RCBTB1Q8NDN9 531 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 OR13C3Q8NGS6 347 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 MRPL38Q96DV4 380 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 NUDT9Q9BW91 350 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 TOLLIPQ9H0E2 274 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 RNF122Q9H9V4 155 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 KNL1Q8NG31 2342 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 RHPN2P1A8MT19 583 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 AP4M1O00189 453 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 VIPR2P41587 438 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 RPL18Q07020 188 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 MESTQ5EB52 335 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 LINC00114Q6XXX2 140 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC43A2Q8N370 569 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 SLC25A36Q96CQ1 311 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 RBM18Q96H35 190 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 PHPT1Q9NRX4 125 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
HMGCS1-202ENST00000433297 TMEM14AQ9Y6G1 99 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms