RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KCNMB1Q16558 191 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 ATP1A1-AS1Q5TC04 95 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 KLHL24Q6TFL4 600 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 BAIAP2L2Q6UXY1 529 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 ZIC4Q8N9L1 334 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 OR13C3Q8NGS6 347 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 LRFN3Q9BTN0 628 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 FAM117AQ9C073 453 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 RBFOX1Q9NWB1 397 aaKnown RBP17.33■□□□□ 0.36
VRK2-205ENST00000432057 TAS2R4Q9NYW5 299 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 CAMK2AQ9UQM7 478 aa17.33■□□□□ 0.36
VRK2-205ENST00000432057 ZNF878C9JN71 531 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 DNPH1O43598 174 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 CXCL13O43927 109 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 LMX1BO60663 402 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 CD2P06729 351 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 NR2C1P13056 603 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 POU3F2P20265 443 aaPredicted RBP17.32■□□□□ 0.36
VRK2-205ENST00000432057 MMP16P51512 607 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 OR1C1Q15619 314 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 ZNF704Q6ZNC4 412 aaPredicted RBP17.32■□□□□ 0.36
VRK2-205ENST00000432057 SERPINA12Q8IW75 414 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 SYNPRQ8TBG9 265 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 ZC3HAV1LQ96H79 300 aaKnown RBP17.32■□□□□ 0.36
VRK2-205ENST00000432057 ADGRG7Q96K78 797 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 FAM173AQ9BQD7 235 aa17.32■□□□□ 0.36
VRK2-205ENST00000432057 MRPS18CQ9Y3D5 142 aaKnown RBP17.32■□□□□ 0.36
VRK2-205ENST00000432057 ISG15P05161 165 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 CD3GP09693 182 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 UBCP0CG48 685 aaKnown RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 MMP15P51511 669 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 TPTEP56180 551 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 CARD18P57730 90 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 PITPNAQ00169 270 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 TGIF1Q15583 401 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 SGCAQ16586 387 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 C10orf128Q5T292 105 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 AGAP6Q5VW22 663 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 YIPF5Q969M3 257 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 ZNF775Q96BV0 537 aaPredicted RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 AGAP4Q96P64 663 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 IP6K3Q96PC2 410 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 NKX3-1Q99801 234 aaPredicted RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 MRI1Q9BV20 369 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 B3GNT4Q9C0J1 378 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 STEAP1Q9UHE8 339 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 RER1O15258 196 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 TTRP02766 147 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 ACSM4P0C7M7 580 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 FAM157BP0CG42 384 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 FSTP19883 344 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 CSRP1P21291 193 aaKnown RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 GFRA1P56159 465 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 PLA2G7Q13093 441 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 PRSS45Q7RTY3 260 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 AKAP14Q86UN6 197 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 OR10D3Q8NH80 312 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 ZNF416Q9BWM5 594 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 PBOV1Q9GZY1 135 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 ZNF703Q9H7S9 590 aaPredicted RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 RNF121Q9H920 327 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 PNRC2Q9NPJ4 139 aaKnown RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 DDX28Q9NUL7 540 aaKnown RBP17.31■□□□□ 0.36
VRK2-205ENST00000432057 ETV7Q9Y603 341 aa17.31■□□□□ 0.36
VRK2-205ENST00000432057 ARPC4-TTLL3A0A0A6YYG9 625 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 FAM240BA0A1B0GVZ2 78 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 IGFBP3P17936 291 aaPredicted RBP17.3■□□□□ 0.36
VRK2-205ENST00000432057 HSD11B1P28845 292 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 DCTDP32321 178 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 SRP9P49458 86 aaKnown RBP17.3■□□□□ 0.36
VRK2-205ENST00000432057 ZNF133P52736 654 aaPredicted RBP17.3■□□□□ 0.36
VRK2-205ENST00000432057 CLDN15P56746 228 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 PSMA6P60900 246 aaKnown RBP17.3■□□□□ 0.36
VRK2-205ENST00000432057 GPR176Q14439 515 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 TMEM244Q5VVB8 128 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 PLPP7Q8NBV4 271 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 CLEC1AQ8NC01 280 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 ROBO4Q8WZ75 1007 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 ABCG5Q9H222 651 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 AUNIPQ9H7T9 357 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 FAM86C1Q9NVL1 165 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 NLKQ9UBE8 527 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 CKLFQ9UBR5 152 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 FOXD3Q9UJU5 478 aaPredicted RBP17.3■□□□□ 0.36
VRK2-205ENST00000432057 FOXJ3Q9UPW0 622 aa17.3■□□□□ 0.36
VRK2-205ENST00000432057 MEIOCA2RUB1 952 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 ITGA5P08648 1049 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 TAF13Q15543 124 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 SLC36A2Q495M3 483 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 MTFR2Q6P444 385 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 LINGO2Q7L985 606 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 SULF2Q8IWU5 870 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 ELMOD2Q8IZ81 293 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 CHAC2Q8WUX2 184 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 GCDHQ92947 438 aaPredicted RBP17.29■□□□□ 0.36
VRK2-205ENST00000432057 PNPLA2Q96AD5 504 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 FER1L6-AS2Q96M78 137 aa17.29■□□□□ 0.36
VRK2-205ENST00000432057 SF3B5Q9BWJ5 86 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms