RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 POTEKPQ9BYX7 375 aa11.93□□□□□ -0.5
SNRNP200-202ENST00000429650 VN1R1Q9GZP7 353 aa11.93□□□□□ -0.5
SNRNP200-202ENST00000429650 MED9Q9NWA0 146 aa11.93□□□□□ -0.5
SNRNP200-202ENST00000429650 COQ3Q9NZJ6 369 aa11.93□□□□□ -0.5
SNRNP200-202ENST00000429650 MED11Q9P086 117 aa11.93□□□□□ -0.5
SNRNP200-202ENST00000429650 HHLA2Q9UM44 414 aa11.93□□□□□ -0.5
SNRNP200-202ENST00000429650 DCDC2BA2VCK2 349 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 M0QYG6 137 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 SOX1O00570 391 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 LDLRAD4O15165 306 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 CALCRP30988 508 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 OR1D5P58170 312 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 GSG1LQ6UXU4 331 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 GALNT11Q8NCW6 608 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 OR13C3Q8NGS6 347 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 TINAGL1Q9GZM7 467 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 G6PC2Q9NQR9 355 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 UPB1Q9UBR1 384 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 LOC107986453A0A1B0GWG9 222 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 METTL12A8MUP2 240 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 H3BUI4 141 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 OR2T1O43869 369 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 ZNF217O75362 1048 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 PMS2P2O95744 297 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 OR4E1P0C645 316 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 DNASE1L1P49184 302 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 GMFBP60983 142 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 SPOCK1Q08629 439 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 C1orf189Q5VU69 101 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 LANCL3Q6ZV70 420 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 SLC26A10Q8NG04 563 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 CCDC107Q8WV48 283 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 CMKLR1Q99788 373 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 UNC13CQ8NB66 2214 aa11.92□□□□□ -0.5
SNRNP200-202ENST00000429650 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 OR6C76A6NM76 312 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ALOX12BO75342 701 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ISG15P05161 165 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 FOLR1P15328 257 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ZP3P21754 424 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ACHEP22303 614 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 PTGS2P35354 604 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ARRB1P49407 418 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SORDQ00796 357 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 CFHR1Q03591 330 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 FMODQ06828 376 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 GK2Q14410 553 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SSPNQ14714 243 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 MOGAT2Q3SYC2 334 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 OR10K2Q6IF99 312 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 DCXRQ7Z4W1 244 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SLC51BQ86UW2 128 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 JAGN1Q8N5M9 183 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ASB13Q8WXK3 278 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 LINC00052Q96N35 136 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 NPAS1Q99742 590 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 MYEF2Q9P2K5 600 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 LOC390937A0A1W2PQ73 354 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 MS4A18H0YCH9 400 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 LMX1BO60663 402 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 AMY2AP04746 511 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ZNF735P0CB33 412 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ZNF823P16415 610 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 HNRNPKP61978 463 aaKnown RBP eCLIP11.91□□□□□ -0.53e-7■■■■□ 24
SNRNP200-202ENST00000429650 ACY1Q03154 408 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 PMPCAQ10713 525 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SQSTM1Q13501 440 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 TDGQ13569 410 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 MS4A18Q3C1V0 323 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 LY6G6FQ5SQ64 297 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 LRFN4Q6PJG9 635 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 C5orf46Q6UWT4 87 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 PRSS42Q7Z5A4 293 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 LINC00346Q8IVM7 164 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 WDFY1Q8IWB7 410 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ZNF248Q8NDW4 579 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ASB10Q8WXI3 467 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 SLCO5A1Q9H2Y9 848 aa11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 ZMAT3Q9HA38 289 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-202ENST00000429650 IGHV1OR21-1A0A087WYE8 117 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 A0A0A6YYH2 397 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 A6NIZ1 184 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 A6NJ64 397 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 CYB5AP00167 134 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 RPA2P15927 270 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 RAP1BP61224 184 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 RAP1AP62834 184 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 BAMBIQ13145 260 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 NR0B2Q15466 257 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 MAJINQ3KP22 176 aa11.9□□□□□ -0.5
SNRNP200-202ENST00000429650 C1orf100Q5SVJ3 147 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms