RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 BBS1Q8NFJ9 593 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 FAM216AQ8WUB2 273 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 DNASE2BQ8WZ79 361 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 HMCESQ96FZ2 354 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 TMEM19Q96HH6 336 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC35E1Q96K37 410 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SNX22Q96L94 193 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 PHB2Q99623 299 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 G6PC3Q9BUM1 346 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ELOVL1Q9BW60 279 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ANGPTL4Q9BY76 406 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC5A7Q9GZV3 580 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 Q9N2J8 555 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 B3GAT1Q9P2W7 334 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 IL36AQ9UHA7 158 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ST6GALNAC2Q9UJ37 374 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CLDN16Q9Y5I7 305 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 COLEC10Q9Y6Z7 277 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SCN8AQ9UQD0 1980 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 DOCK4Q8N1I0 1966 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 LOC100509620A0A075B734 347 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 TGIF2-C20orf24A0A0A6YYL0 155 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 TRAV39A0A0B4J263 110 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 K7EPK0 472 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 P2RX6O15547 441 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF264O43296 627 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF354AO60765 605 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SCGNO76038 276 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CST4P01036 141 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC35G6P0C7Q6 338 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CYBAP13498 195 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 DGKAP23743 735 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 PCSK1P29120 753 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 NAA10P41227 235 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CDKN1CP49918 316 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 PDLIM4P50479 330 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 RPS20P60866 119 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 RANP62826 216 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 RPL19P84098 196 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 PGGHGQ32M88 737 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF280BQ86YH2 543 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 RBM45Q8IUH3 476 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 HS6ST3Q8IZP7 471 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 FAM71E2Q8N5Q1 922 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR4D11Q8NGI4 311 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SCAMP5Q8TAC9 235 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 TMEM18Q96B42 140 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SMIM19Q96E16 107 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 TMEM169Q96HH4 297 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 NKX3-1Q99801 234 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 CNTNAP3Q9BZ76 1288 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 ADGRL4Q9HBW9 690 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 A4GALTQ9NPC4 353 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 MYNNQ9NPC7 610 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 HINT3Q9NQE9 182 aaKnown RBP8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC7A11Q9UPY5 501 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 V9GY05 133 aa8.01□□□□□ -1.13
CDC42BPA-206ENST00000429440 FRMPD3Q5JV73 1810 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 LOC105371242A0A075B767 164 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 DRGXA6NNA5 263 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 M0QZQ0 153 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 RAB27BO00194 218 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLCO2B1O94956 709 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC16A8O95907 504 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 MBPP02686 304 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-206ENST00000429440 LCATP04180 440 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 CD3DP04234 171 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 GAPDHP04406 335 aaKnown RBP8□□□□□ -1.13
CDC42BPA-206ENST00000429440 PGA4P0DJD7 388 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 PGA5P0DJD9 388 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR5H8P0DN80 308 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 HSD3B2P26439 372 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR10J1P30954 320 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
CDC42BPA-206ENST00000429440 RPS11P62280 158 aaKnown RBP eCLIP8□□□□□ -1.13
CDC42BPA-206ENST00000429440 FAM3AP98173 230 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZNF616Q08AN1 781 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 RUNX2Q13950 521 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 ZXDCQ2QGD7 858 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-206ENST00000429440 HIKESHIQ53FT3 197 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 FBXO42Q6P3S6 717 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 ANKRD16Q6P6B7 361 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 PRSS54Q6PEW0 395 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 TMEM205Q6UW68 189 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 SLC25A42Q86VD7 318 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 MYPOPQ86VE0 399 aaPredicted RBP8□□□□□ -1.13
CDC42BPA-206ENST00000429440 CPOQ8IVL8 374 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 MCEMP1Q8IX19 187 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 GBGT1Q8N5D6 347 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 NOXO1Q8NFA2 376 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR9K2Q8NGE7 335 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 OR1L6Q8NGR2 347 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 CDS1Q92903 461 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 SMIM12Q96EX1 92 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 C16orf58Q96GQ5 468 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 PPP1R16AQ96I34 528 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 C4orf36Q96KX1 117 aa8□□□□□ -1.13
CDC42BPA-206ENST00000429440 MYADMQ96S97 322 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms