RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RNF212Q495C1 297 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 TEX44Q53QW1 395 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 TCP11X2Q5H9J9 407 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CDKL4Q5MAI5 379 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 NCBP2-AS2Q69YL0 99 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 TMEM205Q6UW68 189 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RTL4Q6ZR62 310 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 PIWIL3Q7Z3Z3 882 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CPEB2Q7Z5Q1 589 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 DPPA2Q7Z7J5 298 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 PLCZ1Q86YW0 608 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CCDC71Q8IV32 467 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 PRSS58Q8IYP2 241 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RCOR2Q8IZ40 523 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CYP4Z2PQ8N1L4 340 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ASCC1Q8N9N2 400 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 KCTD6Q8NC69 237 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 MDS2Q8NDY4 140 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR52B6Q8NGF0 335 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 OR5K2Q8NHB8 316 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF671Q8TAW3 534 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 M1APQ8TC57 530 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 DTD1Q8TEA8 209 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 S100PBPQ96BU1 408 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 BIRC8Q96P09 236 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZIM3Q96PE6 472 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 SIGLEC12Q96PQ1 595 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 QKIQ96PU8 341 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ATP6V0BQ99437 205 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 COPS8Q99627 209 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ATF6BQ99941 703 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CITED2Q99967 270 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 KCNS3Q9BQ31 491 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ZNF670Q9BS34 389 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 COPS4Q9BT78 406 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 KIFC1Q9BW19 673 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RAB17Q9H0T7 212 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 GANQ9H2C0 597 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 LRRC40Q9H9A6 602 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 NINJ2Q9NZG7 142 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 TRPC4Q9UBN4 977 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 DCDC2Q9UHG0 476 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CRLS1Q9UJA2 301 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 RUVBL2Q9Y230 463 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 KLF13Q9Y2Y9 288 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 ARHGAP21Q5T5U3 1957 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 CUBNO60494 3623 aa3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 SONP18583 2426 aaKnown RBP3.72□□□□□ -1.81
HMGB3P5-201ENST00000428894 HRNRQ86YZ3 2850 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 HEATR5BQ9P2D3 2071 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TUBAL3A6NHL2 446 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 GABRR3A8MPY1 467 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC1A7O00341 560 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 BCKDKO14874 412 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 PGRMC2O15173 223 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ADAM20O43506 726 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TLX2O43763 284 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 NME2P1O60361 137 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 VPS26AO75436 327 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ATP6AP2O75787 350 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 FCER2P06734 321 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 LYNP07948 512 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 DUX4L4P0CJ87 422 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 GABRA1P14867 456 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 RAB3AP20336 220 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 HNF1AP20823 631 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 MDH1P40925 334 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ACAA2P42765 397 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 YAP1P46937 504 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 AKR1D1P51857 326 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 CEBPGP53567 150 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SUCLG1P53597 346 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 CLDN15P56746 228 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 VSX2P58304 361 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TAS2R60P59551 318 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 GNG11P61952 73 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SKP1P63208 163 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF45Q02386 682 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 CKAP4Q07065 602 aaKnown RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 BAMBIQ13145 260 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 CHIT1Q13231 466 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TSTA3Q13630 321 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF146Q15072 292 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 PDK1Q15118 436 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 PON3Q15166 354 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 KRT31Q15323 416 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TAF1AQ15573 450 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TGFBIQ15582 683 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 TRIP13Q15645 432 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 FAM182AQ5T1J6 154 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 C5orf46Q6UWT4 87 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SSX9Q7RTT3 188 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SMIM15Q7Z3B0 74 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 DCXRQ7Z4W1 244 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SNX20Q7Z614 316 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 LINC00523Q86TU6 105 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 RNF130Q86XS8 419 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC13A5Q86YT5 568 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 HIPK1Q86Z02 1210 aa3.71□□□□□ -1.82
HMGB3P5-201ENST00000428894 CRLF3Q8IUI8 442 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms