RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ATF6BQ99941 703 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 WACQ9BTA9 647 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 MED18Q9BUE0 208 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 MND1Q9BWT6 205 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 C1QTNF6Q9BXI9 259 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 CDCA4Q9BXL8 241 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 MROQ9BYG7 248 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 HDHD2Q9H0R4 259 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACOXLQ9NUZ1 547 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF224Q9NZL3 707 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 CLEC2DQ9UHP7 191 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 AMDHD2Q9Y303 409 aa6.91□□□□□ -1.3
HMGA1P4-201ENST00000428643 MAST4O15021 2626 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 A0A087WXM4 84 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 IQCMA0A1B0GVH7 501 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 TMEM129A0AVI4 362 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PRR32B1ATL7 298 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 J3QLW9 94 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PTHP01270 115 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 MT-ND5P03915 603 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 SMIM18P0DKX4 95 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 HOXB1P14653 301 aaPredicted RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PPP3CBP16298 524 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF19P17023 458 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 HSD11B1P28845 292 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 OPRL1P41146 370 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 RAB1AP62820 205 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 GRB2P62993 217 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PSG4Q00888 419 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 GALK2Q01415 458 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ROM1Q03395 351 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 EGR3Q06889 387 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ECH1Q13011 328 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 RAB39AQ14964 217 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PPA1Q15181 289 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 MED22Q15528 200 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 TAB1Q15750 504 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 TBCEQ15813 527 aaPredicted RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 NEDD8Q15843 81 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF829Q3KNS6 432 aaPredicted RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 CCDC92Q53HC0 331 aaPredicted RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ELFN2Q5R3F8 820 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 TIMM23BQ5SRD1 257 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR2G6Q5TZ20 316 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PLEKHG7Q6ZR37 379 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF367Q7RTV3 350 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 P2RY8Q86VZ1 359 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 WFDC8Q8IUA0 241 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 SPARTQ8N0X7 666 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 WDR31Q8NA23 367 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR10S1Q8NGN2 331 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR52N1Q8NH53 320 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR1F12Q8NHA8 337 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 RNF133Q8WVZ7 376 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 SPTSSAQ969W0 71 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZC3HAV1LQ96H79 300 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 SIGLEC11Q96RL6 698 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 USB1Q9BQ65 265 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 WNT5BQ9H1J7 359 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 ELOVL3Q9HB03 270 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 MOV10Q9HCE1 1003 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 PNRC2Q9NPJ4 139 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 DDX28Q9NUL7 540 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLCO1C1Q9NYB5 712 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 MRM2Q9UI43 246 aaKnown RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 FBXL3Q9UKT7 428 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 GTF2A1LQ9UNN4 478 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 CAB39Q9Y376 341 aaPredicted RBP6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 LRP12Q9Y561 859 aa6.9□□□□□ -1.3
HMGA1P4-201ENST00000428643 SPENQ96T58 3664 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 C5orf49A4QMS7 147 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR6C6A6NF89 314 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 TRIM64A6NGJ6 449 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 METTL15A6NJ78 407 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 F5H5K5 113 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 J3QKU1 62 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 M0R1B8 84 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF254O75437 659 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SULT1C4O75897 302 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 RPP14O95059 124 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 LCKP06239 509 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 CELA3BP08861 270 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 TACSTD2P09758 323 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 HSMCR30P0CW71 290 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 CCNOP22674 350 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 STOMP27105 288 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 APEX1P27695 318 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 PSMB9P28065 219 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 APLNRP35414 380 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 PSMB10P40306 273 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC6A9P48067 706 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 CX3CR1P49238 355 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 GDI2P50395 445 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 PRKXP51817 358 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 GBX2P52951 348 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms