RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 GLIPR2Q9H4G4 154 aa8.17□□□□□ -1.1
CTNND1-208ENST00000428599 METTL17Q9H7H0 456 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-208ENST00000428599 LIN7CQ9NUP9 197 aaKnown RBP8.17□□□□□ -1.1
CTNND1-208ENST00000428599 CCDC187A0A096LP49 1063 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ZNF785A8K8V0 405 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ZNF701M0R085 212 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 KLK10O43240 276 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 XRCC3O43542 346 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 GABRB3P28472 473 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 CCR2P41597 374 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 NPY4RP50391 375 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 DUSP2Q05923 314 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 OPCMLQ14982 345 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 HSD17B11Q8NBQ5 300 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 RASD2Q96D21 266 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 C2CD4DB7Z1M9 353 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TSPAN12O95859 305 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 FAM157BP0CG42 384 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TNFRSF1AP19438 455 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 GCAP28676 217 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 NKX2-1P43699 371 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 MRPL19P49406 292 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 RPS25P62851 125 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 KCNAB1Q14722 419 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 LEXMQ3ZCV2 418 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 THEM4Q5T1C6 240 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 FAM162BQ5T6X4 162 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 NLRP8Q86W28 1048 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TAAR9Q96RI9 348 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 NRSN2Q9GZP1 204 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 LRRC3CA6NJW4 275 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 PMS2P2O95744 297 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ZDHHC11BP0C7U3 371 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TNFSF8P32971 234 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TAGLN2P37802 199 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 CLDN15P56746 228 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 CSNK1G2P78368 415 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 MS4A2Q01362 244 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 EMX1Q04741 257 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TMEM200AQ86VY9 491 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 C17orf78Q8N4C9 275 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 LILRA3Q8N6C8 439 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 OR2G3Q8NGZ4 309 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 NEURL3Q96EH8 262 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 YTHDF2Q9Y5A9 579 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 SERTM1A2A2V5 107 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 H0Y8X5 98 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 K7ESM1 405 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 M0QYG6 137 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 PRKRAO75569 313 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 UBL3O95164 117 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 FBP1P09467 338 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ADRA2CP18825 462 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 S100A4P26447 101 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TATDN3Q17R31 274 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 TBPL2Q6SJ96 375 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ETFBKMTQ8IXQ9 262 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 PLPP6Q8IY26 295 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 PLPP7Q8NBV4 271 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 LFNGQ8NES3 379 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 OR2M7Q8NG81 312 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 CCDC74BQ96LY2 380 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 DSCR3O14972 297 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 ZNF750Q32MQ0 723 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 SMIM21Q3B7S5 101 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 BTNL3Q6UXE8 466 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 MOB3BQ86TA1 216 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 FGF14Q92915 247 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 YIPF5Q969M3 257 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 FBXO17Q96EF6 278 aa8.16□□□□□ -1.1
CTNND1-208ENST00000428599 GAR1Q9NY12 217 aaKnown RBP8.16□□□□□ -1.1
CTNND1-208ENST00000428599 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-208ENST00000428599 SOD1P00441 154 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 CYC1P08574 325 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 GLULP15104 373 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 ACOT6Q3I5F7 207 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-208ENST00000428599 ZNF385BQ569K4 471 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 TMEM211Q6ICI0 200 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 BATF2Q8N1L9 274 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 PARP16Q8N5Y8 322 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 CA5BP1Q8WTZ4 195 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 LYSMD1Q96S90 227 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 TINAGL1Q9GZM7 467 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-208ENST00000428599 SLC17A4Q9Y2C5 497 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 ZNF835Q9Y2P0 537 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 A0A087WZY1 265 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 A0A096LPE4 126 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 A0A1W2PPZ6 126 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 M0R082 166 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 SELENOFO60613 162 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 IHHQ14623 411 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 USP51Q70EK9 711 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 SLCO4A1Q96BD0 722 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 OPALINQ96PE5 141 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 CXorf36Q9H7Y0 433 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 EMC7Q9NPA0 242 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 TRGV10A0A0A0MS01 117 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 DBX1A6NMT0 343 aa8.15□□□□□ -1.1
CTNND1-208ENST00000428599 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms