RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 STK40Q8N2I9 435 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 OR11H7Q8NGC8 314 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 CCDC110Q8TBZ0 833 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 EMG1Q92979 244 aaKnown RBP0.71□□□□□ -2.3
LINC02541-201ENST00000427157 C10orf35Q96D05 121 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 PLEKHA8Q96JA3 519 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 CSPG4P5Q96PW8 444 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 COPS8Q99627 209 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 DBNDD1Q9H9R9 158 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 CSNK1G1Q9HCP0 422 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 ASF1BQ9NVP2 202 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 CHTOPQ9Y3Y2 248 aaKnown RBP0.71□□□□□ -2.3
LINC02541-201ENST00000427157 ATP10AO60312 1499 aa0.71□□□□□ -2.3
LINC02541-201ENST00000427157 ATP8B3O60423 1300 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 MAPK8IP3Q9UPT6 1336 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 IGLV1-36A0A0B4J1U3 117 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 ZNF816-ZNF321PA0A0X1KG74 233 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 RGSL1A5PLK6 1076 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 KRBOX1C9JBD0 128 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 GLSO94925 669 aaPredicted RBP0.7□□□□□ -2.3
LINC02541-201ENST00000427157 PAHP00439 452 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 RPA2P15927 270 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 GRIA1P42261 906 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 CCT3P49368 545 aaKnown RBP0.7□□□□□ -2.3
LINC02541-201ENST00000427157 ECH1Q13011 328 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 DMC1Q14565 340 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 ZNF77Q15935 545 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 KLHL12Q53G59 568 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 SOHLH1Q5JUK2 328 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 ZFP41Q8N8Y5 198 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 CPNE4Q96A23 557 aaPredicted RBP0.7□□□□□ -2.3
LINC02541-201ENST00000427157 PSKH2Q96QS6 385 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 THUMPD2Q9BTF0 503 aaKnown RBP0.7□□□□□ -2.3
LINC02541-201ENST00000427157 TRIM62Q9BVG3 475 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 CTNNA3Q9UI47 895 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 VANGL2Q9ULK5 521 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 KIF3AQ9Y496 699 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 KCNE3Q9Y6H6 103 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 LTBP2Q14767 1821 aa0.7□□□□□ -2.3
LINC02541-201ENST00000427157 KIF16BQ96L93 1317 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 GABRR3A8MPY1 467 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 PRAMEF26H0Y7S4 382 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.69□□□□□ -2.3
LINC02541-201ENST00000427157 PLIN3O60664 434 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 FGGP02679 453 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 CD37P11049 281 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 RND2P52198 227 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 SYNJ2BPP57105 145 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 SLC9A3R2Q15599 337 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 RIPPLY2Q5TAB7 128 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 AMMECR1LQ6DCA0 310 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 H3F3CQ6NXT2 135 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 DEGS2Q6QHC5 323 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 LRRC74BQ6ZQY2 392 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 EGFL6Q8IUX8 553 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 FAM83FQ8NEG4 500 aaPredicted RBP0.69□□□□□ -2.3
LINC02541-201ENST00000427157 FMO2Q99518 471 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 TRIM45Q9H8W5 580 aaPredicted RBP0.69□□□□□ -2.3
LINC02541-201ENST00000427157 RHBDL2Q9NX52 303 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 ING4Q9UNL4 249 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 PIGLQ9Y2B2 252 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 PALLDQ8WX93 1383 aa0.69□□□□□ -2.3
LINC02541-201ENST00000427157 NDUFC2-KCTD14E9PQ53 114 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 GOLGA8SH3BPF8 625 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 DYNC1I1O14576 645 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 CCDC22O60826 627 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 FSTL3O95633 263 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 CRYGBP07316 175 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 IQCF3P0C7M6 154 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 CBR1P16152 277 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 GPX6P59796 221 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 RPL23P62829 140 aaKnown RBP0.68□□□□□ -2.3
LINC02541-201ENST00000427157 BIKQ13323 160 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 PPIL2Q13356 520 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 PSTKQ8IV42 348 aaKnown RBP0.68□□□□□ -2.3
LINC02541-201ENST00000427157 COX18Q8N8Q8 333 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 OR10AD1Q8NGE0 317 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 CXorf40AQ8TE69 158 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 SCFD1Q8WVM8 642 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 UBE2Q2Q8WVN8 375 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 STMN2Q93045 179 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 COQ2Q96H96 371 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 MARVELD1Q9BSK0 173 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 TPPP3Q9BW30 176 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 ANKRD19PQ9H560 264 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 CWH43Q9H720 699 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 SLC7A8Q9UHI5 535 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 ADAM28Q9UKQ2 775 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 NPTNQ9Y639 398 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 CNTNAP1P78357 1384 aa0.68□□□□□ -2.3
LINC02541-201ENST00000427157 BAZ2AQ9UIF9 1905 aaKnown RBP0.68□□□□□ -2.3
LINC02541-201ENST00000427157 IGKV1-8A0A0C4DH67 115 aa0.67□□□□□ -2.3
LINC02541-201ENST00000427157 A0A1B0GWJ7 208 aa0.67□□□□□ -2.3
LINC02541-201ENST00000427157 AQP9O43315 295 aa0.67□□□□□ -2.3
LINC02541-201ENST00000427157 SURF6O75683 361 aaKnown RBP0.67□□□□□ -2.3
LINC02541-201ENST00000427157 IDH1O75874 414 aaKnown RBP0.67□□□□□ -2.3
LINC02541-201ENST00000427157 SEMA3DO95025 777 aa0.67□□□□□ -2.3
LINC02541-201ENST00000427157 SCELO95171 688 aa0.67□□□□□ -2.3
LINC02541-201ENST00000427157 UQCRFS1P1P0C7P4 283 aa0.67□□□□□ -2.3
LINC02541-201ENST00000427157 CD28P10747 220 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms