RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 IQCF1Q8N6M8 205 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 NPEPL1Q8NDH3 523 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 SLC26A10Q8NG04 563 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 OR9Q1Q8NGQ5 310 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 SLC25A40Q8TBP6 338 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 MARS2Q96GW9 593 aaKnown RBP11.66□□□□□ -0.54
SNX3-204ENST00000426155 FEVQ99581 238 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 PIMREGQ9BSJ6 248 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 TSSK6Q9BXA6 273 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 DGCR6LQ9BY27 220 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 BCL2L14Q9BZR8 327 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 OR2J1Q9GZK6 312 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 BPESC1Q9GZL8 116 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 RACGAP1Q9H0H5 632 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 HIVEP2P31629 2446 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 GNGT2O14610 69 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 CSF3P09919 207 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 SLC25A16P16260 332 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 RPS27P42677 84 aaKnown RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 LSM6P62312 80 aaKnown RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 CRMP1Q14194 572 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 ELFN2Q5R3F8 820 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 ZNF362Q5T0B9 420 aaPredicted RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 RPL13AP3Q6NVV1 102 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 ZBTB46Q86UZ6 589 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 SLC37A3Q8NCC5 494 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 OR51L1Q8NGJ5 315 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 GIPC3Q8TF64 312 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 POP5Q969H6 163 aaKnown RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 C4orf45Q96LM5 186 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 SNX18Q96RF0 628 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 DDOQ99489 341 aa11.65□□□□□ -0.54
SNX3-204ENST00000426155 MRPL22Q9NWU5 206 aaKnown RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 PDP1Q9P0J1 537 aaPredicted RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 NDRG4Q9ULP0 352 aaKnown RBP11.65□□□□□ -0.54
SNX3-204ENST00000426155 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 LOC390937A0A1W2PQ73 354 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 OR6C6A6NF89 314 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 TVP23AA6NH52 213 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 IDH3BO43837 385 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 E2F6O75461 281 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 TIPRLO75663 272 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 ABHD16AO95870 558 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 GYPBP06028 91 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 ERCC1P07992 297 aaPredicted RBP11.64□□□□□ -0.55
SNX3-204ENST00000426155 CLUP10909 449 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 GSTM3P21266 225 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 PRKACGP22612 351 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 NR4A2P43354 598 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 PPP1CBP62140 327 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 TEKQ02763 1124 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 HNRNPA0Q13151 305 aaKnown RBP11.64□□□□□ -0.55
SNX3-204ENST00000426155 TMEM249Q2WGJ8 235 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 SLC36A3Q495N2 470 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 CFAP77Q6ZQR2 320 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 LNX2Q8N448 690 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 NEU4Q8WWR8 484 aaPredicted RBP11.64□□□□□ -0.55
SNX3-204ENST00000426155 EIF3KQ9UBQ5 218 aaKnown RBP11.64□□□□□ -0.55
SNX3-204ENST00000426155 GRIP1Q9Y3R0 1128 aa11.64□□□□□ -0.55
SNX3-204ENST00000426155 ZSCAN5BA6NJL1 495 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 H3BN98 237 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 ICMTO60725 284 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 IGHV3-13P01766 116 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 COX5BP10606 129 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 ZNF16P17020 682 aaPredicted RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 COL8A2P25067 703 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 GCH1P30793 250 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 HIST1H3AP68431 136 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 CCL8P80075 99 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 LOXL1Q08397 574 aaPredicted RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 RIPK1Q13546 671 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 TRIP10Q15642 601 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 HIST2H3PS2Q5TEC6 136 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 SLC18B1Q6NT16 456 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 TMEM154Q6P9G4 183 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 HIST2H3AQ71DI3 136 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 PAPD5Q8NDF8 572 aaKnown RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 PROKR2Q8NFJ6 384 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 OR2T33Q8NG76 320 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 OR1F12Q8NHA8 337 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 KLF14Q8TD94 323 aaPredicted RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 UBASH3BQ8TF42 649 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 YIPF5Q969M3 257 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 RBM4Q9BWF3 364 aaKnown RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 HCAR1Q9BXC0 346 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 MS4A5Q9H3V2 200 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 MED20Q9H944 212 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 MYOZ1Q9NP98 299 aaPredicted RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 HINT3Q9NQE9 182 aaKnown RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 FBXO9Q9UK97 447 aaPredicted RBP11.63□□□□□ -0.55
SNX3-204ENST00000426155 STARD10Q9Y365 291 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 SVEP1Q4LDE5 3571 aa11.63□□□□□ -0.55
SNX3-204ENST00000426155 CUBNO60494 3623 aa11.62□□□□□ -0.55
SNX3-204ENST00000426155 LRP5LA4QPB2 252 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms