RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 C11orf87Q6NUJ2 197 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PAPD4Q6PIY7 484 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2W3Q7Z3T1 314 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 ADGRE4PQ86SQ3 457 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 FJX1Q86VR8 437 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 OR4D6Q8NGJ1 314 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 OR5M8Q8NGP6 311 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 GPR119Q8TDV5 335 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 THRSPQ92748 146 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 FGGYQ96C11 551 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 CST11Q9H112 138 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 SAV1Q9H4B6 383 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 PRMT8Q9NR22 394 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 VSIG4Q9Y279 399 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 FREM3P0C091 2139 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 TICRRQ7Z2Z1 1910 aa6.76□□□□□ -1.33
SMARCC1-202ENST00000425518 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TRIOO75962 3097 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 FANCMQ8IYD8 2048 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TMED7-TICAM2A0A0A6YYA0 188 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 IGHV5-51A0A0C4DH38 117 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SPTY2D1-AS1A0A0U1RR47 76 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 LOC101059948A0A1B0GTJ6 334 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 OR14I1A6ND48 311 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF735P0CB33 412 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 CNR1P21554 472 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 PRKXP51817 358 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 PLCXD2Q0VAA5 305 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SMAD2Q15796 467 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TEX30Q5JUR7 227 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 FAM166AQ6J272 317 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 JMJD6Q6NYC1 403 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 DCXRQ7Z4W1 244 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TRAPPC6BQ86SZ2 158 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 KCNRGQ8N5I3 272 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 INO80EQ8NBZ0 244 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 THAP6Q8TBB0 222 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 WNT2BQ93097 391 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC46A1Q96NT5 459 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 PELOQ9BRX2 385 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 NUDT9Q9BW91 350 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF416Q9BWM5 594 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 S1PR5Q9H228 398 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 C1orf198Q9H425 327 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC17A5Q9NRA2 495 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ASF1BQ9NVP2 202 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC39A1Q9NY26 324 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 C2orf16Q68DN1 1984 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 BRWD1Q9NSI6 2320 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 RTTNQ86VV8 2226 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 METTL21EPA6NDL7 271 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 DNASE2O00115 360 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SULT1C2O00338 296 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 IFNA6P05013 189 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 IGHV4-34P06331 123 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 PGCP20142 388 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 IL11P20809 199 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC6A8P48029 635 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 GLO1Q04760 184 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF169Q14929 603 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ELOCQ15369 112 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM88Q6PEY1 159 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM17Q86X19 198 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 CATSPERDQ86XM0 798 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF248Q8NDW4 579 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 RLN3Q8WXF3 142 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 C8orf44Q96CB5 159 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TXNIPQ9H3M7 391 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 OR52A1Q9UKL2 312 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 TNFSF18Q9UNG2 199 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 IGLV1-36A0A0B4J1U3 117 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 AHSA1O95433 338 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ERCC1P07992 297 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ARRB1P49407 418 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SSBP1Q04837 148 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 OR7A5Q15622 319 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SGCBQ16585 318 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 VWA2Q5GFL6 755 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 C1orf140Q5VVS0 124 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 RAB12Q6IQ22 244 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 FDX2Q6P4F2 183 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 OR52N5Q8NH56 324 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 MARC2Q969Z3 335 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 KLHDC7BQ96G42 594 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 NPAS1Q99742 590 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SELENOIQ9C0D9 397 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 SCPEP1Q9HB40 452 aa6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 ASCC3Q8N3C0 2202 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-202ENST00000425518 MEGF11A6BM72 1044 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 BCL2L11O43521 198 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 FADS1O60427 444 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2F2O95006 317 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 CD96P40200 585 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 AKR1D1P51857 326 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 FOXL2P58012 376 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2F1Q13607 317 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 SNTB1Q13884 538 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 NSDHLQ15738 373 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PDSS1Q5T2R2 415 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 C16orf47Q6ZP98 133 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms