RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 MIB2Q96AX9 1013 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MVB12AQ96EY5 273 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MEGF10Q96KG7 1140 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 TMEM138Q9NPI0 162 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 FBXL3Q9UKT7 428 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 SLC22A13Q9Y226 551 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ARPC5O15511 151 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 SMPD2O60906 423 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 RBBP9O75884 186 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 PIAS2O75928 621 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 OR2A4O95047 310 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 CSN2P05814 226 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 SPARCP09486 303 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 SPCS3P61009 180 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 EBPQ15125 230 aaKnown RBP11.69□□□□□ -0.54
COL12A1-205ENST00000425443 Q499Y3 187 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 TFAP2EQ6VUC0 442 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 C3P1Q6ZMU1 363 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 SLC36A1Q7Z2H8 476 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 CADM4Q8NFZ8 388 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ADIPOR1Q96A54 375 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 OR2A7Q96R45 310 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 INTS14Q96SY0 518 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 TMEM272A0A1B0GTI8 110 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 FAM74A7A6NL05 159 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 L7N2F9 121 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 LPLP06858 475 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 NFYAP23511 347 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-205ENST00000425443 S100PP25815 95 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 KCNJ3P48549 501 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 EPHA4P54764 986 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 HLXQ14774 488 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-205ENST00000425443 FAM74A3Q4VXF1 159 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 ASPHD2Q6ICH7 369 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 C9orf40Q8IXQ3 194 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 SPICQ8N5J4 248 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 OR4C16Q8NGL9 310 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 FGF21Q9NSA1 209 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 AKAP7Q9P0M2 348 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-205ENST00000425443 TMEM14AQ9Y6G1 99 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 LOC100509620A0A075B734 347 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 hCG_1807616A0A1W2PRN6 198 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 PRAF2O60831 178 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-205ENST00000425443 WDPCPO95876 746 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 NMBP08949 121 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 CPN1P15169 458 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 BAMBIQ13145 260 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 C3orf33Q6P1S2 294 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 C11orf88Q6PI97 169 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 C16orf47Q6ZP98 133 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-205ENST00000425443 STPG2Q8N412 459 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 NKD1Q969G9 470 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 WWTR1Q9GZV5 400 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 SHARPINQ9H0F6 387 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 LDAHQ9H6V9 325 aa11.68□□□□□ -0.54
COL12A1-205ENST00000425443 URB1O60287 2271 aaKnown RBP11.67□□□□□ -0.54
COL12A1-205ENST00000425443 TRAV36DV7A0A075B6V5 113 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 TRAV18A0A075B6X5 111 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 IGHV3-20A0A0C4DH32 117 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 CREBL2O60519 120 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-205ENST00000425443 APOC3P02656 99 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 RLN2P04090 185 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 IGKV3-11P04433 115 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF35P13682 527 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 ABCD3P28288 659 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 EMC4Q5J8M3 183 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 RGS7BPQ6MZT1 257 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-205ENST00000425443 OGFOD3Q6PK18 319 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 DNM1P46Q6ZS02 220 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 CCDC74AQ96AQ1 378 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 WDFY4Q6ZS81 3184 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 FXYD6-FXYD2A0A087WZ82 144 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 TRBV5-5A0A0J9YX44 114 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 GIPP09681 153 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-205ENST00000425443 LIPCP11150 499 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 MUC20Q8N307 709 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-205ENST00000425443 OR2G2Q8NGZ5 317 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 DUSP19Q8WTR2 217 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 UTP23Q9BRU9 249 aaKnown RBP11.67□□□□□ -0.54
COL12A1-205ENST00000425443 OR11A1Q9GZK7 315 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 FXYD6Q9H0Q3 95 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 BIN3Q9NQY0 253 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 FREM2Q5SZK8 3169 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 DMDP11532 3685 aa11.67□□□□□ -0.54
COL12A1-205ENST00000425443 A0A1B0GX78 115 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 NAP1L6A6NFF2 107 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 ACOT7O00154 380 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 TCAPO15273 167 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
COL12A1-205ENST00000425443 CDC20BQ86Y33 519 aa11.66□□□□□ -0.54
COL12A1-205ENST00000425443 LIPHQ8WWY8 451 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms