RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 A8MWP6 167 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 TBX19O60806 448 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 CRHP06850 196 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 EPHA1P21709 976 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 ITPKBP27987 946 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 GDNFP39905 211 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 ZP1P60852 638 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 FAM71E1Q6IPT2 247 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 NECAB3Q96P71 396 aaPredicted RBP8.9□□□□□ -0.98
USP54-205ENST00000424265 GREB1Q4ZG55 1949 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 K7ESF4 209 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 IGHV2-5P01817 119 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 CYC1P08574 325 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 C8orf89P0DMQ9 161 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 CELP19835 753 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 TBPP20226 339 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 AQP1P29972 269 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 RNF44Q7L0R7 432 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 VTCN1Q7Z7D3 282 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 SERPINA11Q86U17 422 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 AQP11Q8NBQ7 271 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 SARGQ9BW04 601 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 ULBP3Q9BZM4 244 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 UBQLN4Q9NRR5 601 aa8.9□□□□□ -0.98
USP54-205ENST00000424265 A0A1W2PN81 502 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 ZNF320A2RRD8 509 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 NPIPB8E9PQR5 432 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 SLC25A17O43808 307 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 AIFM1O95831 613 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 MMP7P09237 267 aaPredicted RBP8.9□□□□□ -0.99
USP54-205ENST00000424265 ANKRD34CP0C6C1 535 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 CPEP16870 476 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 CHRNA7P36544 502 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 CRISP1P54107 249 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 CHRFAM7AQ494W8 412 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 ZNF311Q5JNZ3 666 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 SLC48A1Q6P1K1 146 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 PATE1Q8WXA2 126 aa8.9□□□□□ -0.99
USP54-205ENST00000424265 GALR3O60755 368 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 DBIP07108 87 aaKnown RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 FURINP09958 794 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ERGP11308 486 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 PRRX1P54821 245 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 TMEM64Q6YI46 380 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 SLC16A14Q7RTX9 510 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR13C2Q8NGS9 318 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 TMEM234Q8WY98 164 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 KCTD12Q96CX2 325 aaKnown RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 RAB39BQ96DA2 213 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ZNF764Q96H86 408 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 TAAR9Q96RI9 348 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 TP53RKQ96S44 253 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 NRIP2Q9BQI9 281 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ZNF426Q9BUY5 554 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 CLEC5AQ9NY25 188 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 C7orf77A4D0Y5 90 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 GLOD5A6NK44 160 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 GABRR3A8MPY1 467 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 GPRIN2O60269 458 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR2J2O76002 312 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ZFPL1O95159 310 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 UBL3O95164 117 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 TSPAN15O95858 294 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 IFNA21P01568 189 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ARG1P05089 322 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 BCHEP06276 602 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ST6GAL1P15907 406 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ADH6P28332 368 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 TIAL1Q01085 375 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP54-205ENST00000424265 PTGES3Q15185 160 aaKnown RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 DCST1Q5T197 706 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 HBMQ6B0K9 141 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 VWA1Q6PCB0 445 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 METTL27Q8N6F8 245 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 TCEANCQ8N8B7 351 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR9A4Q8NGU2 314 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 PIGXQ8TBF5 258 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR2S2Q9NQN1 319 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 CA10Q9NS85 328 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 SLC7A11Q9UPY5 501 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 NOP16Q9Y3C1 178 aaKnown RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 NPTNQ9Y639 398 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 SERTM2A0A1B0GWG4 89 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR6C76A6NM76 312 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 BLOC1S5-TXNDC5H3BN57 136 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 K7EPK0 472 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 ZNF749O43361 778 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 PTNP21246 168 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 KHDC3LQ587J8 217 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 FAM71E2Q8N5Q1 922 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR1J1Q8NGS3 322 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 OR5AK3PQ8NH89 298 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 TM4SF18Q96CE8 201 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 MTHFD2LQ9H903 347 aaPredicted RBP8.89□□□□□ -0.99
USP54-205ENST00000424265 RASD1Q9Y272 281 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 DOCK6Q96HP0 2047 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 A0A1B0GV72 72 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 DCTN6O00399 190 aa8.89□□□□□ -0.99
USP54-205ENST00000424265 EIF4EP06730 217 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms